Gene SO_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4108 
SymbolmshG 
ID1171721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4265609 
End bp4266829 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content48% 
IMG OID637345841 
ProductMSHA biogenesis protein MshG 
Protein accessionNP_719638 
Protein GI24375595 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTTT ATCAATACCG TGGACGCAGT GGACAAGGTC AAGCCGTAAC GGGTCAGCTC 
GATGCCGCCT CCGAAAGTGC GGCGGCCGAT ATGCTGTTAT CCCGCGGCAT TATTCCTTTG
GAAGTTAAAG CGGCAAAGGT CGCGAAGTCA TTTTCACTGA CGCAGCTCTT TGGTAGTAAA
GTCGGTTTGG ATGAATTACA AATTTTTACT CGGCAAATGT ATTCACTCAC GCGTTCGGGG
ATCCCGATTT TGCGGGCCAT TGCCGGTTTA TCTGAAACCG CGCATTCCCA ACGGATGAAG
GATGCGCTTA ATGATATTTC TGAGCAACTC ACCGCAGGTC GCCCGTTGTC ATCTGCTATG
AACCAACATC CAGATGTGTT TGATTCACTG TTTGTTTCTA TGGTGCATGT GGGGGAGAAC
ACAGGTAAGT TGGAGGATGC CTTTATTCAG CTCTCGGGCT ATATCGAGCG TGAGCAGGAA
ACTCGCCGCC GGATTAAGGC CGCGATGCGT TATCCGATCT TTGTATTGAT TGCGATTGGC
CTGGCGATGG TGATCTTAAA TATCATGGTG ATCCCCAAAT TTGCCGAAAT GTTTTCCCGT
TTCGGTGCAG ATTTGCCTTG GGCGACCAAG GTGCTGATTG GCACATCTAA CTTATTTGTT
AACTATTGGC CTTTGATGTT GGTGATGTTA CTTGGCGCCA TCATTGGGAT CCGTTATTGG
CACCATACGG AAAAAGGTGA AAAACAATGG GATAAGTGGA AATTACATAT TCCCGCAGTG
GGTTCGATTA TTGAGCGTTC GACCCTTGCC CGTTATTGCC GCAGTTTTTC GATGATGTTA
AGCGCGGGCG TGCCGATGAC ACAGGCGCTG AGCCTTGTGG CGGATGCGGT GGATAACGCC
TATATGCACG ACAAGATTGT TGGTATGCGC CGCGGCATCG AATCCGGCGA ATCTATGCTG
AGGGTATCGA ATCAGAGCAA GTTATTTACA CCATTGGTGT TGCAAATGGT CGCAGTAGGA
GAAGAAACCG GGCAGATTGA TCAGTTATTG AATGATGCTG CCGATTTCTA CGAAGGGGAG
GTCGACTATG ACCTTAAAAA TCTTACCGCC AAATTAGAAC CGATCTTAAT TGGTATTGTG
GCCGTTATTG TATTGATATT AGCCTTGGGT ATTTATCTGC CCATGTGGGA TATGCTCAAT
GTGGTCAAAG GTGGTAAGTA A
 
Protein sequence
MPVYQYRGRS GQGQAVTGQL DAASESAAAD MLLSRGIIPL EVKAAKVAKS FSLTQLFGSK 
VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIG
LAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWPLMLVML LGAIIGIRYW
HHTEKGEKQW DKWKLHIPAV GSIIERSTLA RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGESML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGIV AVIVLILALG IYLPMWDMLN VVKGGK