| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4102 |
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| Symbol | mshO |
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| ID | 1171715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4261731 |
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| End bp | 4262579 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345835 |
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| Product | MSHA biogenesis protein MshO |
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| Protein accession | NP_719632 |
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| Protein GI | 24375589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCTT TATCCGTTAA GCGTAAGCAT CAATGCTCGC GGGGTTTTAC CTTAGTTGAA
ATGGTCACAG CGATCCTTAT CTTAGGCATT CTTGTGGTTG GGGTGAGTAG CTTTATCATT
TTCGGCACGC GGATTTTTGT GGAGTCGAGT TCGGTCGACC AAGTGTTAAG TCAAAGCCGT
TTTGCCATTG AGCGTATAAC CCGTGAACTA AGGAGCGCGC TGCCTAACAG TGTGCGACTT
AATGGCAATA ATCTCACTTA TCAATGTGTA GAGTTTGTTC CCATCGAGGC GAGCACCACC
TATTTAGCGA TGCCGATTGC GCCGGGGGCT GCAGCCTTAA CAGGAACCGT TATTTTAGAT
AATGTGGCCA GTGATATTGC GGTTAACCAA TATGCTTGGA TTTATCCTTT GACCGATAGC
GATGTGTATA ACAGTGCTAG GCAAAAACGT GCGCAGATAA ACAGCATTAG CACCGCTGCT
AATCAAGTGA ACTTAACCTT TACGGCTAGC GCAAGATTTG CCGAAGCTTC TCCGCGCCAA
CGGATCTATT TTGCTTCTGC CCCCGTCAGT TATTGCTTTG AAAAAGCGCC ATCCAGTAAT
GAGTTAATCT TAACGCGTTA TACTGGTTAT GGGTTGACTG CTAGCCAGCC AGTACCTGCG
GATATGGGGT CTGGCGTGTT GATGGCACAA GGTATCGCAA ATGCCTTAAC CAGTAGTGCT
GATTTACCGT TGATCTTAAC GCCGTCGAGT CTAGTCAATA ATGCGATGGT GCATCTACAG
CCACGATTTA ATGTTAATGG CGAGACATTT CAGTATCGAC ATCAAGTGCA GGTGATCAAT
GTCCCTTAA
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| Protein sequence | MGSLSVKRKH QCSRGFTLVE MVTAILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR
FAIERITREL RSALPNSVRL NGNNLTYQCV EFVPIEASTT YLAMPIAPGA AALTGTVILD
NVASDIAVNQ YAWIYPLTDS DVYNSARQKR AQINSISTAA NQVNLTFTAS ARFAEASPRQ
RIYFASAPVS YCFEKAPSSN ELILTRYTGY GLTASQPVPA DMGSGVLMAQ GIANALTSSA
DLPLILTPSS LVNNAMVHLQ PRFNVNGETF QYRHQVQVIN VP
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