Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4092 |
Symbol | |
ID | 1171706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4247355 |
End bp | 4248203 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345826 |
Product | carbon-nitrogen family hydrolase |
Protein accession | NP_719622 |
Protein GI | 24375579 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCA GCTTGTTGCA ATGTCAGAGC AGTCGCGACG TCAGTGCGAA CCTGTTGTTT ATCGAATCGC AGCTTGAGGA ATTAACTCAG GAGCGGCAGC AGTGGGGCGA TAATTCCCCT CATTTGGTGG TGTTACCCGA ATGCAGTTTA TTGTTTGGTG GCCATGAGAG CCAGCAACTT GCCTATGCGG GCGATAGTCA TCACAGCCAG TTAAAATCAG CGTTAAGTGC TTTAGCTACG CGCTATCGGG TGTTTATGGT GGCAGGGACG ATTCCTGCGC TAGCGGAGGG TGGTCGTGTC TATAGCCGTT GTTATCTGTT TGATGATAAA GGTGATACCT TAGGGCATTA CGATAAACTG CATTTATTTG ATGTTGATGT TGCCGATGGC ACCAAACAAT ACCGCGAGAG CGAAACCTTT TGCCCCGGCG ATCATATCAG TGTTATCGAT ACACCTTTTG GCAAAATTGG CCTATCCATC TGTTATGATT TACGCTTTCC TGACTTATTT CGGGCAATGC GTCTCGCTGG AGCCGAGATT ATTACCGTTC CTTCGGCCTT TACTAAGGTC ACCGGAGAAG CCCACTGGCA AGTGTTATTG CAGGCCAGAG CCATTGAGAC TCAATGTTTT ATCGTAGCCG CTGCCCAGTG GGGAGCCCAT AACCAAGGTA GCCGTGAAAC TTGGGGGCAA AGCATGGTGA TTGGCCCTTG GGGCAACATC ATTGCCGAGC GGAAAACAGG AACGGGTTGG GTACATGCCG ATATCGATTT AACCGAGGTG AATAGCATCC GCAGCAAAAT GCCCGTAATG CAACATAATC GGTTTAATGT ACCGATGATT AAACGCTAA
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Protein sequence | MRISLLQCQS SRDVSANLLF IESQLEELTQ ERQQWGDNSP HLVVLPECSL LFGGHESQQL AYAGDSHHSQ LKSALSALAT RYRVFMVAGT IPALAEGGRV YSRCYLFDDK GDTLGHYDKL HLFDVDVADG TKQYRESETF CPGDHISVID TPFGKIGLSI CYDLRFPDLF RAMRLAGAEI ITVPSAFTKV TGEAHWQVLL QARAIETQCF IVAAAQWGAH NQGSRETWGQ SMVIGPWGNI IAERKTGTGW VHADIDLTEV NSIRSKMPVM QHNRFNVPMI KR
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