| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4091 |
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| Symbol | tldD |
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| ID | 1171705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4245767 |
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| End bp | 4247215 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637345825 |
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| Product | tldD protein |
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| Protein accession | NP_719621 |
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| Protein GI | 24375578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTT TAGCACAAGT AGAGCAAAGT TTATTAAAGG GTGGCTTAGC CCTAGATGGT
TTACAACAGT ATTTAAACAG CATACACCAA CATAAAGTCG ATTTTTCTGA CCTCTATTTC
CAAGGTAGCC GCCATGAATC TTGGGTGCTC GAAGATGGCA TTATTAAAGA TGGTAGCTTC
CACATTGAGC GTGGTGTGGG TGTGCGCGCC ATTAGTGGCG AGAAAACCGG TTTTGCCTAT
GCCGATGATA TTACGCCTGC TGCATTAACG GCTGCGGTTG AAGCTGCCCG TGGCATTGCT
AGTGCGGGTG AGCAAACTCA AGTGCAAGCC TTTAAACGTC AAAAAGCATT GGCGTTATAC
GACAGCTTAG ATCCGATTGC GGCGATGGAA GAAGTCAAAA AAATCAACCT GCTGAAAGAA
GCCGATGCGT TTATTCGCAG TCTAGATAGC CGGATTATTC AAGTGGTGGT CAGTCTTGCG
GGCGTGCATG AAGAAATACT GGTTGCCGCC AGCGATGGTA CGTTAGCCGC GGACATTCGT
CCCTTAGTGC GCTTTAACTG CAGTGTGATT TTAGAAGAAA ACGGTAAACG TGAACGTGGT
GGCGCTGGTG GTGGTGGTCG TCACGATTAC AGCGTGTTAA TGGTCAATGA TGACACTGGT
TTGCCGATGT GCTTTGCTTT CGCCCGCGAA GCGGTGCGTC AAGCGCAGGT CAACCTGAAT
GCCATCGATG CTCCAGCAGG GGAAATGACC GTGGTGTTAG GCAATGGCTG GCCGGGGGTG
TTACTCCATG AGGCGGTTGG TCATGGACTT GAAGGTGACT TTAACCGTAA GGGCAGCAGT
GCCTTTAGTG GCATGGTTGG TCAGCAAGTG GCGTCGAAAC TCGTGACTGT GGTGGACGAT
GGCACGCTTG CGAATCGTCG TGGCTCACTG AGCATCGATG ATGAAGGGGT ACAAACCCAG
AGAACCGTGT TAATTGAAGA CGGTATTCTC AAAGGTTACC TACAAGATAA ATTAAATGCG
CGCCTGATGG GCGTTGCACC AACGGGTAAT GGTCGCCGCG AATCCTATGC GCATCTGCCG
ATGCCGCGAA TGACCAATAC CTATATGACA TCGGGTGAGT CCGAACCGAG CGACATCATC
AAGTCGGTGA AGAAGGGCAT TTACGCGCCT AACTTCGGCG GTGGTCAGGT CGATATCACC
TCTGGCAAGT TTGTGTTCTC AGCCTCCGAA GCCTATTTGA TCGAAAATGG TGAAGTGACT
CAAGCGATTA AGGGTGCGAC CCTGATTGGT AATGGTCCTG AGGCCATGAG CCAGATTTCC
ATGGTGGGTA ACGACATGGC GCTAGATAAG GGTGTCGGCG TATGTGGTAA GGATGGCCAA
AGCGTGCCTG TGGGTGTGGG TCAACCGACC CTTAAGCTCG ACAAACTAAC CGTAGGCGGT
ACTGCATAA
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| Protein sequence | MPFLAQVEQS LLKGGLALDG LQQYLNSIHQ HKVDFSDLYF QGSRHESWVL EDGIIKDGSF
HIERGVGVRA ISGEKTGFAY ADDITPAALT AAVEAARGIA SAGEQTQVQA FKRQKALALY
DSLDPIAAME EVKKINLLKE ADAFIRSLDS RIIQVVVSLA GVHEEILVAA SDGTLAADIR
PLVRFNCSVI LEENGKRERG GAGGGGRHDY SVLMVNDDTG LPMCFAFARE AVRQAQVNLN
AIDAPAGEMT VVLGNGWPGV LLHEAVGHGL EGDFNRKGSS AFSGMVGQQV ASKLVTVVDD
GTLANRRGSL SIDDEGVQTQ RTVLIEDGIL KGYLQDKLNA RLMGVAPTGN GRRESYAHLP
MPRMTNTYMT SGESEPSDII KSVKKGIYAP NFGGGQVDIT SGKFVFSASE AYLIENGEVT
QAIKGATLIG NGPEAMSQIS MVGNDMALDK GVGVCGKDGQ SVPVGVGQPT LKLDKLTVGG
TA
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