Gene SO_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4085 
SymbolchiA 
ID1171700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4238538 
End bp4240637 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content46% 
IMG OID637345820 
Productchitinase A 
Protein accessionNP_719615 
Protein GI24375572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAACC CGCAAGCTGG TGTCGTCGTG GGTTACTGGC ATAACTGGTG TGGTGGCGCT 
GGCTATAAAG GTGGCGTTGC TCCATGTGTT AGCTTGGCGC AGGTGAACCC TCAATATAAT
GTTGTCGATA TCTCATTCAT GAAGGTATAT GGCGCAACAG GAAGTATCCC TACTTTTAAA
CTCGATCCCG CTGTTGGCTT ATCTGAAGCA CAATTTATTG ACCAAATTGG TGAACTCAAT
CGCCAAGGCC GCGCGGTATT AATCGCATTG GGCGGCGCTG ACGCACACAT TGAGCTTCGC
AAAGGACAAG AACACGATCT GGCCAATGAA ATTATTCGTC TGGTTGAAAA GTACGGCTTT
GATGGACTGG ATATCGATTT AGAGCAAGCT GCCGTAACGG CTGCAGATAA CCAAATCGTC
ATTCCCGCGG CGCTACGGAT CGTTAAAGAT CATTACCGTA AACAGCAGAA AAACTTTTTA
ATCACCATGG CACCCGAATT CCCTTACCTC ACTACAGGGG GAAAATACGT GCCTTATATC
AACGCCCTTG AAGGTTATTA TGATTGGATT AATCCACAGT TTTACAACCA AGGCGGCGAT
GGCATTTATA TCGAAGGCAT AGGTTGGATT GCCCAAAACA ACGACAGTTT AAAGCAAGAA
TTTATTTACC ATATCTCTGA CGCGCTAGTG AATGGCACAA ACGGCTTCAC TAAAATCCCC
CATGACAAGC TAGTTTTTGG TATTCCAACC AATATTGATG CCGCAGCTAC AGGGTATGTC
AGCGATCCAA ATGCATTGTT TGCAGCCTTT GAACAATTAA AGAACCAAGG ACAACCGTTA
CGCGGCCTTA TGACATGGTC AGTGAACTGG GATATGGGCA AAAATGCCGC TGGGCAGGCC
TATAATGAGT CGTTTATTAA GGCATATGGA CCCTTTATCC ACGGCCAAGA TATCACTCCA
CCTGAACCTG AAAACGGTAA ACCTATTTTC AGTGGCCTAA GCAATACTCG TGTTAAATTA
GGCGGAACCT TCAATGCTAT GGACGGAGTA AGCGCCTATG ATGAAGAAGA TAAAGATCTG
ACCCAACAAA TCCAAGTCAC AGGCGACGTT AACACCAACC AGATTGGCCT CTATCCCCTG
ACATATAAAG TGACAGATTC CGACAATAAC ACCACTGAAC AAGTGCGTAC GGTTGAAGTG
TATAACACTA AACCGGAGCT ATCTGGTGTT AGCAACACCA CAATCATACT TGCAACCCCA
TTTGATGCTA TGGCTGGCGT CAGCGCCACA GATGCTGAAG ATGGCAACTT AACCCCAAAT
ATCCGTGTTG AAGGCGAAGT GGATAGCAAT CGTGTGGGCC AATATCAACT GACCTATAGC
GTTAGCGATA GCGCAGGTGA ACAAACCCGC GCAGTACGCC TTGTAACCGT GCAAGAACAA
GGTGCTGTGT GTGAAAATCT ATGGAGCGCT AGCAAAATTT ACCTAGGTGG CGACACAGTA
AATTATGCTG GAAAAATTTG GTTAGCGGGA TGGTGGACTC AAGGTGAACA ACCTGATTTG
GCAGGCGAGT GGGGTGTTTG GAAGTCTAAG GGCGACAGCG ATTGTGACTC AGGCTTACCT
CCGGTTATCA CTCCTAACTT TACAGTGAGT GGCTTAGCCT CAAGCTACAT TCTCAATCAA
GGTCAAGTTA GCATTAATTT TAACGTTAAC ACGAACCAAG CAATGGAGTT AACCGCTAAC
CTCACTCAAG AGCAACGAAT CCTTGCTAGC ACGACTGCAA CAATAAATGG CAACGGTGCC
ATGGTATTAC AAGCGGAATC ATTGGAAGCG GGTGCTTATC AAGTTGTGAT CAGCGCTAAA
GATAAGAATC TTACGCAGTC CTATAACGTC TCGCTAGTTC AAGGTGATGA TGGTAGTGAA
CCCGTTGAAT ACCCAGCCTA TGTCGCAGGT AATCAATATC AAGCGGGGAA TATTGTTACA
AACGCCGGTG GTGTCTACCA ATGCCGACCT TGGCCAAACA GTGGTTGGTG TAGCGGCTCA
GCGCCTTACT ATGCGCCAGG TACAGGTAGC GCTTGGCAAG ATGCGTGGAC TAAGCATTAA
 
Protein sequence
MVNPQAGVVV GYWHNWCGGA GYKGGVAPCV SLAQVNPQYN VVDISFMKVY GATGSIPTFK 
LDPAVGLSEA QFIDQIGELN RQGRAVLIAL GGADAHIELR KGQEHDLANE IIRLVEKYGF
DGLDIDLEQA AVTAADNQIV IPAALRIVKD HYRKQQKNFL ITMAPEFPYL TTGGKYVPYI
NALEGYYDWI NPQFYNQGGD GIYIEGIGWI AQNNDSLKQE FIYHISDALV NGTNGFTKIP
HDKLVFGIPT NIDAAATGYV SDPNALFAAF EQLKNQGQPL RGLMTWSVNW DMGKNAAGQA
YNESFIKAYG PFIHGQDITP PEPENGKPIF SGLSNTRVKL GGTFNAMDGV SAYDEEDKDL
TQQIQVTGDV NTNQIGLYPL TYKVTDSDNN TTEQVRTVEV YNTKPELSGV SNTTIILATP
FDAMAGVSAT DAEDGNLTPN IRVEGEVDSN RVGQYQLTYS VSDSAGEQTR AVRLVTVQEQ
GAVCENLWSA SKIYLGGDTV NYAGKIWLAG WWTQGEQPDL AGEWGVWKSK GDSDCDSGLP
PVITPNFTVS GLASSYILNQ GQVSINFNVN TNQAMELTAN LTQEQRILAS TTATINGNGA
MVLQAESLEA GAYQVVISAK DKNLTQSYNV SLVQGDDGSE PVEYPAYVAG NQYQAGNIVT
NAGGVYQCRP WPNSGWCSGS APYYAPGTGS AWQDAWTKH