Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4081 |
Symbol | |
ID | 1171699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4236494 |
End bp | 4237825 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345819 |
Product | amino acid permease |
Protein accession | NP_719611 |
Protein GI | 24375568 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAC AAAAACCGGG CTTAAAGCAA AGCCTTAATC TGTGGCAGGT GGTTGTGATG GGGCTTGCGT ACCTCACGCC TATGGCCGTG TTTGACACCT TCGGAATTGT CTCTGAGATC ACCTCTGGCC ATGTGGCCAC TTCTTACTTG CTCGCATTAG CGGGGATTCT CTTTACCGCT TTTAGCTATG GTCATTTAGT GCGTAAATAT CCCTATGCGG GGTCGGCTTA TACCTATGCT CAAAAAAACT TTAGTCCAAA TGTCGGTTTT ATGGTGGGCT GGTCATCGCT ACTCGATTAT ATGTTTATGC CGATGATCAA CATGCTACTG GCCAAAATCT ACCTCACCGC TATGTTCCCT AATGTGGAAC CTTGGATTTT TATCTTTGGT TTAGTCACAG TTATGACGGT ACTCAACCTT AGAGGCATTG ATTTAGTTGC GAATTTTAAT GGGGTTATCG TATTTGCCCA GATAGCGATT ATCTTAGTGT TTATTGGCTT AATGGCCCAT AGCCTGTCCC TTGGGGAAGG TGAAGGGGTG ATTGCCAGCG TGCGTCCATT CTATTCGGAG CAGGTAACCT TAGCGCCGCT CTTTACCGGT GCAACCATTC TGTGTTTCTC CTTCTTAGGT TTTGATGGCT TAAGTTCGCT AAGTGAAGAA ACTAAGGATG CAAAACGAGT CATCCCACGT GCTATTTTGT TGACGGCGTT GATTGGCGGG GTGATTTTTG TCAGCGTGTC CTATTTCTTG CAACTCTATT TCCCTGATAT TTCTCGCTTC GAGCAGTTGG ATGCCGTTTT GCCTGAGATT GCGCTCTATG TGGGCGGTAA TTTATTCCAG TCTATTGTAC TAGTGGCGAC AACAATTGCG GTGTTAGCTT CGGGCATGGC AGCTCATGCG GGGGTGGCGC GCATCCTCTA TGTGATGGGG CGCGACAATA TGTTGCCCAA TAAAGGCTTT GGTTATGTTC ACCCTAAATG GCGTACCCCG GCATTTAACG TGGTTCTGGT GGGGTTACTG GCGCTTTCGG CGGTGTCCTT TGATTTAGAA ATGGCTTTAG CCTTAGTGAA CTTCGGTGCT TTAGTTGCCT TTACCTTTGT TAACCTGTCG GTGATTGTGC AGTTTTATAT TAAAGAAAAA CGTAATCAAT CCCTTAAGGA GCATTTGCAG TATTTCGTTT TGCCCTTGTG TGGCGCGGCA ACCATTGGCG TGCTGTGGAT TAACCTTGAG CCTCAGTCAT TAGAACTCGG TTTAATTTGG GGAGCTGTGG GGATGCTGTA TCTGGCGCTG CGCAGCCTAC GCTTGCGCAA GGCGGTAGAA TTGCAGAGTT AA
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Protein sequence | MSQQKPGLKQ SLNLWQVVVM GLAYLTPMAV FDTFGIVSEI TSGHVATSYL LALAGILFTA FSYGHLVRKY PYAGSAYTYA QKNFSPNVGF MVGWSSLLDY MFMPMINMLL AKIYLTAMFP NVEPWIFIFG LVTVMTVLNL RGIDLVANFN GVIVFAQIAI ILVFIGLMAH SLSLGEGEGV IASVRPFYSE QVTLAPLFTG ATILCFSFLG FDGLSSLSEE TKDAKRVIPR AILLTALIGG VIFVSVSYFL QLYFPDISRF EQLDAVLPEI ALYVGGNLFQ SIVLVATTIA VLASGMAAHA GVARILYVMG RDNMLPNKGF GYVHPKWRTP AFNVVLVGLL ALSAVSFDLE MALALVNFGA LVAFTFVNLS VIVQFYIKEK RNQSLKEHLQ YFVLPLCGAA TIGVLWINLE PQSLELGLIW GAVGMLYLAL RSLRLRKAVE LQS
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