Gene SO_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4079 
Symbol 
ID1171697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4233397 
End bp4233930 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID637345817 
Producthypothetical protein 
Protein accessionNP_719609 
Protein GI24375566 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG TTGGTGATTC AGAACATTTT AAACAGCCCT ATGACAGTAA CGACGAGTAT 
GTCAGTAAAA CTGAGGATAA GCGTGACTGC GAAGCGGCTC AAAAAGTCGG TATGGAACTG 
GTCTCACTCA GCAAAACCCA GCTAGATAAA ATCGAGCTGG ACGAGCACTT ATACGACAGC 
ATTCAGCAAG CTCATAAGAT CAAGCCAAAG ACCGAAGCCT ATCGCCGCCA TATGCAATAT 
ATCGGCAAAC TGATGCGCAA CGTCGATATT GAACCGATCA AGGCGTCGCT CGCCGTGGTG 
CTGAACAAAA ACAGCAACGA AACCGCCAAG CTGCAAATGT TCGAGAAAAT GCGTGAGCGT 
TTACTCACCC AAGGCGACGG TGAAATCCAA ACCGTAGTGG AACATTACCC ACAGTTGGAT 
AGACAAAAAC TCCGCACCTT AGTGCGCCAA GCGACCAAAG AGCTGGCGAA AGGCCCAGAG 
TCAAAATCCT CAAAAGAGCT GTTTAAATAT TTACGCAGCG AAATCCAAGA CTAA
 
Protein sequence
MKIVGDSEHF KQPYDSNDEY VSKTEDKRDC EAAQKVGMEL VSLSKTQLDK IELDEHLYDS 
IQQAHKIKPK TEAYRRHMQY IGKLMRNVDI EPIKASLAVV LNKNSNETAK LQMFEKMRER 
LLTQGDGEIQ TVVEHYPQLD RQKLRTLVRQ ATKELAKGPE SKSSKELFKY LRSEIQD