| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4077 |
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| Symbol | |
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| ID | 1171695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4229648 |
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| End bp | 4231774 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345815 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_719607 |
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| Protein GI | 24375564 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCAA CTGCTTTAAA TATCCCCCAT GGTTTTAAAT GCTCGGAAAT ATCCACCGCA
CTTACCCTTG CATTAGGCTT ATCCTTTGCC CCGCTGGCAA TGGCCAATGA TAATGAACAG
ACTCAGATTG AGCGTATTTT GGTCCACGGT GAGCAGAGTA TCTGCCGCAA TGCCCTAGGC
TCAGCCGATG CCTTACTTAA AGATCAAGGC GTTGATTTCT CTGAAGCTGG AGGAGTTTCG
GCGCTACCAG TGCTGAACGG CATGATGGGC GATCGCATTA AAGTGTTAGT CGACGGCGCA
GACATTACCG CCTCCTGCGC CAACCAAATG AACCCACCGC TATCTTATGT TTCTGCCAAC
CAAATCAACT CGGTCGAAGT GGTCGCGGGC GTGTCCCCCG TCAGTGCGGG CGGCGACAAT
ATTGCTGGCG TGATTAAGGT TAATAGTCTC AATCCTAAGT TTACTGACAG CGAAAACTTA
AGTTTTGAAA GCGGTGAGAT TTCATCGGGA TACCGCAGCA CCAGCGACAG CTTATTACTC
GGCGCCAAAG CCGGTATTGC CAGCAAAAAT GTAAGCTTAA GCTATCAAGG AGCCTATGAA
GACGCCAACA GTTACCACGA TGGTAACGGC GACAAAGTGC TCGATACTTT ATATCGCGCT
CAAAACCACG CCTTAACGGC AGCATGGCGC GATGAAAAAC AACAACTGGC CGTTAAACTG
ACCCATCAAG CCATTCCATT TCAAGGTTTT CCTAACCAAT ACATGGATAT GACTGATAAC
AAGAGCTACG GTGCCCTAGT TCGCTATCTA CGGGATTTAG AAAATGACGG CGAGTTTAGT
GCCCAGCTCA ACTGGCACAG TGTAAAACAT GAAATGGGCT TCTTCACCCC AGAAAAAACC
GGCAAAATGC CGATGAATAC AGAGGGTAGC GATTACAGCT ACCAACTGCA CTGGCGCTTA
ACTATGGGGG ATGACAGTAC GCTACTGCTT GGCCAGGAAT ACTATAGCTA TCAATTAGAT
GATATTTGGC CAGCGGTGCC AGGCACTATG ATGGCCCCCA ATGACTATAT CAATATTAAC
GATGGTGAAC GTCGCCGCGC TGCAGTTTAC GGTGAATGGC AACAAAACCT CAATCCGCTT
TGGTGGTTAT CCGCTGGGGT ACGCTATGAA TATGTGACCA CAGATACGGG TGAAGTGCAG
GCCTACAGCA ACATGCCAAT GATGGGCATG CCCAATGTGG ATGCCGAGGC GGCAAAAGCC
TTTAATGCCA TGGACAGAAG CCGAGACGAT AACCTAATCG ATGCGACATT GCTGGCACGC
TATCAATTGT CGGCCAAACA ACAACTGGAA TTTGGCTTAG CCCGTAAAAA TCGCGCCCCT
AACCTCTATG AGCGTTACAG TTGGGGCCGC GGCGTCATGG CAACCACTAT GATTGGCTGG
TATGGCGACG GTAACGGTTA TGTCGGCAAC CCCGATCTAA AGCCCGAAAC GGCCCACACC
CTAAGTGCAG CTTACAAATT TAATGGCGAT GCATGGCAGT TCTCGACCAC GGCTTGGTAT
AGCGCAGTAA CCGATTATAT CGATGCTGAA GTGATTGGCA GCTTTAACCG TACCAGTACA
CCCGCAGGTA AACGCAATAT CCTAAAATTC ACCAACGAAG ATGCCAATTT ATATGGCGCT
AAGTTCAGCG CACTCTACCT ATTAGCCGAT ACCGACAGTG GTAAGTGGCA GATGCTCGGT
AAACTCAACA TCACCCGTGG CGAGCGCGAT GAAGGTAATG AACCACTTTA TCAAATCAAA
CCGTTACAAA CCGAGTTAGC CCTCAGCCAC CAACTCGGCG ATTGGGAAAA CCGCTTGGCA
TGGCAATGGG TGGCGACAAA GGATCGCGTT GATGATCGCC GTTTAGAGAA CGAAACGAGC
AGCTATTCGC TACTGAACTT AAGCAGTAGC ATCAAATGGC AAGAGCTGAG TTTAACCTTT
GCGATCAATA ACCTGTTTGA TACTTACTAT GAGCTGCCAC TCGGTGGTGT AAGCATTGCC
GAGTTTAAGG CCGATAGCAG CAATGGCTTT AGCCAAGTCG CGGGCTCGGG TCGCTCATTT
GAATTAGGTG CAAGCTACCG CTTCTAA
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| Protein sequence | MAATALNIPH GFKCSEISTA LTLALGLSFA PLAMANDNEQ TQIERILVHG EQSICRNALG
SADALLKDQG VDFSEAGGVS ALPVLNGMMG DRIKVLVDGA DITASCANQM NPPLSYVSAN
QINSVEVVAG VSPVSAGGDN IAGVIKVNSL NPKFTDSENL SFESGEISSG YRSTSDSLLL
GAKAGIASKN VSLSYQGAYE DANSYHDGNG DKVLDTLYRA QNHALTAAWR DEKQQLAVKL
THQAIPFQGF PNQYMDMTDN KSYGALVRYL RDLENDGEFS AQLNWHSVKH EMGFFTPEKT
GKMPMNTEGS DYSYQLHWRL TMGDDSTLLL GQEYYSYQLD DIWPAVPGTM MAPNDYININ
DGERRRAAVY GEWQQNLNPL WWLSAGVRYE YVTTDTGEVQ AYSNMPMMGM PNVDAEAAKA
FNAMDRSRDD NLIDATLLAR YQLSAKQQLE FGLARKNRAP NLYERYSWGR GVMATTMIGW
YGDGNGYVGN PDLKPETAHT LSAAYKFNGD AWQFSTTAWY SAVTDYIDAE VIGSFNRTST
PAGKRNILKF TNEDANLYGA KFSALYLLAD TDSGKWQMLG KLNITRGERD EGNEPLYQIK
PLQTELALSH QLGDWENRLA WQWVATKDRV DDRRLENETS SYSLLNLSSS IKWQELSLTF
AINNLFDTYY ELPLGGVSIA EFKADSSNGF SQVAGSGRSF ELGASYRF
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