Gene SO_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4070 
Symbol 
ID1171690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4225087 
End bp4225800 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID637345810 
Producthypothetical protein 
Protein accessionNP_719600 
Protein GI24375557 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATT CTCTTTTAGC TGTATTAGTT GCAGGTGGTC TTTTCTCTGG TGCATTTACT 
GCCACCACAC TTGCGGCCGA GGTGGATTTT CCCCATATCG AAACCATGGG CGTGAGCCAA 
ATTCAAGTCG AGCCCGATAT GGCCGAACTT AATGTGGAAG TGGCGGTTAC CGAGAAAGAC 
GCTAAGGCCG CTAAAGATAA CTCGGATGCG GCTGTCGCGA AATTTATCGC CCGCCTCGCC 
GCCGCAGGGG TGAGTAAAGA ACATATTCAA AGTGCTAACT TAAATCTGCA ACCCCAATAT 
ATTTATGCCC AGGATAAAGC GCCAGAGCTG ACGGGGTACA TCGCCAGTCG TCAAATCACA 
GTAACGGTAA CAGAGTTAAG CCGCTTAAAT ACGATTGTTG ATTCGGCCAT CGAAGAGGGC 
ATGAATCGAG TGAATAACAT CGCCCTTAAA TCAAGCAAAG AGGCTGAATA TGTAGCCAAG 
GCGCGCCAAG AGGCCATTGT CGATGCTAAG CAAAAAGCCG AGTCCTTAGC CAAGGGATTT 
GGGGAAAACT TAGGTAAGAT TTGGCAAATT CGCTATTACG ATCAACGTCC AGTACAACCA 
GTTATGCTGC GTATGAATGC CAAAGCCGAT TATGCAATGG CCGCGGCTGA AAGTTATCAA 
TATGGTCAAG TGACTATCGA AGACCGAGTT GAAGTGGTCT ATAAATTGAA ATAA
 
Protein sequence
MKHSLLAVLV AGGLFSGAFT ATTLAAEVDF PHIETMGVSQ IQVEPDMAEL NVEVAVTEKD 
AKAAKDNSDA AVAKFIARLA AAGVSKEHIQ SANLNLQPQY IYAQDKAPEL TGYIASRQIT 
VTVTELSRLN TIVDSAIEEG MNRVNNIALK SSKEAEYVAK ARQEAIVDAK QKAESLAKGF 
GENLGKIWQI RYYDQRPVQP VMLRMNAKAD YAMAAAESYQ YGQVTIEDRV EVVYKLK