| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4055 |
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| Symbol | metL |
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| ID | 1171679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4208836 |
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| End bp | 4211229 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637345799 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | NP_719585 |
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| Protein GI | 24375542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTT GTCACTTACA TAAATTTGGT GGTTCCAGCT TAGCCGATGC CGATTGTTAC
CGCCGAGTCG CCCATATTCT GTTAACCCAT GGCCACAGTG ATGATCTGGT GGTGGTGTCT
GCCGCGGGTA AAACCACTAA CTTTTTATAT AAGTTGTTGT CACTGCGCGA CAGCAACCAA
TTATGGCAAG AAGAATTACA AGTCCTTATC AGCTATCAGC AAGGCTTGAT TGAGCAGCTG
TTATCTAACG AACAAGCGCG GGATTTACGT GAGCGTTTAA CCACGGATAA AGCCCAGTTA
ATCAGTCTGT TATCTTTAGA TGTACGTAAT GATTATCAAA TTAGCCATGT GGTGAGTTTT
GGTGAGCGTT GGTCAGCACG GCTGATGGCA GCGCTGCTGC GCGAATCGGG TGTGGCCGCA
AGCCATGTGG ATGCCTGCTC GATTCTTGTG GCCGACGAGG CCGCCGTGCC GCAAATCCGT
GTGCAAGAAT CCCGCGCCAA AGTGCAAGCC TTACTGGCGG CCCACCCTAA CGAGCGCTTA
GTGATCACCG GTTTTATTTG TGCTAACGAG CGCGGCGATA CCTTGCTGCT TGGCCGCAAT
GGCTCTGACT TTAGTGCCAG CTTAATTGCT AGCCTTGCCG ACATTGAGCG TGTGACCATT
TGGACCGACG TTGAAGGGGT ATTTAACGCT GACCCGAATA AGATCAACGA TGCGAAATTA
CTCAAGAGCA TGTCCCTCGC CGAAGCCGAC CGCTTGGCGC GTTTAGGCTC ACCCGTGTTG
CATTCACGCA CTTTGCAGCC GCTGTTTAAC ACTGAGGTGA GCTTGGCTGT GCGCTCAAGC
TACGCCTCCC ACACCGACTT TACCCTGATT GCGCCGCACA GTTCCTCAGC GAGTGCGCCC
GTGGTGACCA ATCTAAATGC CGTGGTGTTA TTTGGCTTTA AGATTGCGGG CGATGTGGCC
AGTTTGCTTG ATCAATTGGT GGAGGCGGGA TTAACGCCAC TGGCACATTG GGTATCGGCG
CATCAACGAC TCGAACTTGC CTATACCGCT GAAAACCAAA AACAAGTACA AAAGTTATTG
GATGCGCAGG CCGAAGCCCT CGGCATTAGA GATCTGCAAA TTAATACCGA ACTCGGTTTA
GTGGCGCTTG TGAGTGCCGA TGCCGAGCAT TATCGCCGCA GTTTTGCCCG CTTATTGAGC
CGCGATGCTA AGCCCTTGTT CAGTGGTGAT TTAAGTCTTG TGACCTTAGT GCCACAGTCG
CAGGTTAATC TGCTGACCCA AAAAGTGCAT CGCCGCTGCG CTGGCCCGCG CAAACGTATT
GGGGTATTGC TGCTGGGTGT GGGCAATATT GGCGAGGCGT GGGTGAAGCT GTTTAAGTCA
GTTTCTCCCT CGTTAAATCA AGAGCTTGAA GCGCAAGTCG AGTTAGTCGG TCTGGTCACT
TCCAGTAAAG CCCTGATTAA GTCTAAGGGG GTGGATCTAC AAAGCTGGCA GCAAGAATTC
GATAACGAAG CAACACCTTG GCAGTATGAG CATCTATTTG AACAGTTAGA ACAACTTAAC
TGTGATGAAC TGATTGCATT AGATATCAGC GCCAGCGCCA GTTTAACTCT GCAATACCCA
GAGTTTTTCG AGCGTGGCAT CCATATGGTC AGCGCGAACA AACTGGCGGG TTCAGGCCCA
CTGCCGTTCT ACCGCGAGCT GAAGGAACAA CTCGGTTATC GCCGTTTATT CTGGCGCTAT
AACGCCAGTT GCGGCGCGGG CTTACCTATT CAGCACGCCT TAAACGATCT GCGTAACAGT
GGCGATAGTG TTGAAGCTGT TGGCGGGATT TTCTCTGGCA CTCTTTGCTG GTTGTTTGAG
AAATACGATA CCAGCAAACC CTTCTCGGAA TTAGTGATTG AAGCGCGTGG TTTAGGGATT
ACCGAACCCG ATCCTCGCGA CGATCTTTCT GGCCGCGATA TGCAGCGCAA GTTGCTGATT
TTAGCCCGTG AAATCGGCCT AGAAATCGAG CTTGAGGATA TTGAGCTGCG CTCCTTAGTG
CCTGCTCATT TAGCGGATAT TCCGCTGGAG CAATTCCTTG CCCGTATCGG TGAGCTGGAT
GATGAATTAT TGCAGCAATA TGGCGCAGCG GCGGAACAAA ACAAGGTGCT GAGATATGTC
GCTTCCTTGG ATAATAGCGG CGCAGTCCTC AAAGCCGAGG TGGGATTACA GTGGATTGAT
GCGAGCCACC CCTACGCCAA CCTCACGCCC GGAGACAATG TGTTTGTGAT CCGCTCAGCC
TTCTATCAAG GTAATCCTTT GATCATTCGT GGGCCGGGTG CGGGCCGTGA AGTGACGGCA
GCAGCGGTAC AATCGGATCT AACACAGATC TGCCGCGATC TTCTGCAAGA ATAG
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| Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKTTNFLY KLLSLRDSNQ
LWQEELQVLI SYQQGLIEQL LSNEQARDLR ERLTTDKAQL ISLLSLDVRN DYQISHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEAAVPQIR VQESRAKVQA LLAAHPNERL
VITGFICANE RGDTLLLGRN GSDFSASLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APHSSSASAP
VVTNLNAVVL FGFKIAGDVA SLLDQLVEAG LTPLAHWVSA HQRLELAYTA ENQKQVQKLL
DAQAEALGIR DLQINTELGL VALVSADAEH YRRSFARLLS RDAKPLFSGD LSLVTLVPQS
QVNLLTQKVH RRCAGPRKRI GVLLLGVGNI GEAWVKLFKS VSPSLNQELE AQVELVGLVT
SSKALIKSKG VDLQSWQQEF DNEATPWQYE HLFEQLEQLN CDELIALDIS ASASLTLQYP
EFFERGIHMV SANKLAGSGP LPFYRELKEQ LGYRRLFWRY NASCGAGLPI QHALNDLRNS
GDSVEAVGGI FSGTLCWLFE KYDTSKPFSE LVIEARGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLEIE LEDIELRSLV PAHLADIPLE QFLARIGELD DELLQQYGAA AEQNKVLRYV
ASLDNSGAVL KAEVGLQWID ASHPYANLTP GDNVFVIRSA FYQGNPLIIR GPGAGREVTA
AAVQSDLTQI CRDLLQE
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