Gene SO_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4054 
SymbolmetF 
ID1171678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4207706 
End bp4208599 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content50% 
IMG OID637345798 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionNP_719584 
Protein GI24375541 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTC ATCACGCACA ACATTCGCAT TCGCTAAACC AAAGTTTGTC TGAACTTAAT 
GGCGATATTA ATGTTTCTTT TGAGTTTTTC CCGCCATCAA CCCCTGAAAT GGAACAGATC 
CTGTGGAACT CTATCCGTCG TTTAGAGCCG CTAAACCCTA AATTTGTCTC AGTAACCTAT 
GGGGCAAACT CGGGCGTTCG TGACCGCACC CACGGCGTGA TTGAGCGTAT TCAACAAGAG 
ACTAACTTAG TCGCCGCGCC GCATTTAACC TTAGTTGATG CGAGTGATGA AGAGTTGTTA 
GAGCTGGCAA AGCATTACTG GAAATCGGGT ATTCGCGACA TAGTGGCGCT GCGTGGTGAC 
TTACCTGCGG GTAGCCCAAA ACCGACTCGC TTTGCGGTGG ATTTAGTGCG CCTGCTGCGC 
TCTGTGGCTG ACTTTGATAT TTCGGTAGCC GCTTACCCAG AAGTGCACCC AGATGCGGCT 
AACGCTCAGG CGGATTTGAT TAACCTCAAG CGTAAAATCG ATGCTGGTGC GAGCCGCGCC 
ATTACCCAGT TTTTCTTCGA TGTGGAATCT TACCTGCGTT TTCGCGACCG CTGCGTTGCG 
GCGGGGATTG ATGTCGAAAT CGTTCCCGGC ATTCTGCCCG TGACTAACTT TACCCAGTTA 
AAGCGTTTTG CGGGTATGAC CAATGTGAGC TTACCAAGCT GGTTACATAA GCAGTTTGAT 
GGCCTTGAAA ATGATGCCGG AACCCGTCAG CTGGTGGGCG CTAACGTGGC GATTGATATG 
GTGAAAGTGT TGTCCCGCGA AGGGGTGAAG GATTTCCACT TTTACACTTT AAACCGTGCG 
GAATTGACCT ATGCGATTTG CCATACCCTA GGGGTTCGTC CAAAGGCGGT ATAA
 
Protein sequence
MAFHHAQHSH SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY 
GANSGVRDRT HGVIERIQQE TNLVAAPHLT LVDASDEELL ELAKHYWKSG IRDIVALRGD 
LPAGSPKPTR FAVDLVRLLR SVADFDISVA AYPEVHPDAA NAQADLINLK RKIDAGASRA 
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPSWLHKQFD 
GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPKAV