Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4052 |
Symbol | |
ID | 1171676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4205060 |
End bp | 4205533 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345796 |
Product | MarR family transcriptional regulator |
Protein accession | NP_719582 |
Protein GI | 24375539 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAG AACTCGAGCG GTTAAAGGAG TTATCCCTTG CGGAACACTT AGGCCGCCTG CACCGATTGT GGCGTACCGT GGCAGATGTT GAATTAGCCC CACTTGGGTT AACCCATCCT CGCTGGACCG CATTGTGGAA GTTATTGCGT CTGGGCGATA ACGTGAGCCA AAAGGTGTTG GCGGATGCGC TGGAAATTGA ATTGGCTTCT TTAATGCGCA CCTTAGGGCA GTTAGAGGAA CAAGGTTTAG TCGAGCGTCA TTGTTGCACT AAAGACAAGC GCGCCAGAAT CGTCTCGCTA ACGCCCGCGG GAAAGGATGT ATTAAAGCAA GTCGAAGCGC GGATTATCCG TGTGCGCGGT GAATTATTAG CGGGCATTAG CGCCACTGAG CTTGGCGAGT TTGAACGCAT CATTAGCCTA ATTAGTGAAA ACGCCTTGGC CAAGTTGGCC AACAGCACAG ATATTCTTGA GTGA
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Protein sequence | MYKELERLKE LSLAEHLGRL HRLWRTVADV ELAPLGLTHP RWTALWKLLR LGDNVSQKVL ADALEIELAS LMRTLGQLEE QGLVERHCCT KDKRARIVSL TPAGKDVLKQ VEARIIRVRG ELLAGISATE LGEFERIISL ISENALAKLA NSTDILE
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