Gene SO_4052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4052 
Symbol 
ID1171676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4205060 
End bp4205533 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content50% 
IMG OID637345796 
ProductMarR family transcriptional regulator 
Protein accessionNP_719582 
Protein GI24375539 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAG AACTCGAGCG GTTAAAGGAG TTATCCCTTG CGGAACACTT AGGCCGCCTG 
CACCGATTGT GGCGTACCGT GGCAGATGTT GAATTAGCCC CACTTGGGTT AACCCATCCT
CGCTGGACCG CATTGTGGAA GTTATTGCGT CTGGGCGATA ACGTGAGCCA AAAGGTGTTG
GCGGATGCGC TGGAAATTGA ATTGGCTTCT TTAATGCGCA CCTTAGGGCA GTTAGAGGAA
CAAGGTTTAG TCGAGCGTCA TTGTTGCACT AAAGACAAGC GCGCCAGAAT CGTCTCGCTA
ACGCCCGCGG GAAAGGATGT ATTAAAGCAA GTCGAAGCGC GGATTATCCG TGTGCGCGGT
GAATTATTAG CGGGCATTAG CGCCACTGAG CTTGGCGAGT TTGAACGCAT CATTAGCCTA
ATTAGTGAAA ACGCCTTGGC CAAGTTGGCC AACAGCACAG ATATTCTTGA GTGA
 
Protein sequence
MYKELERLKE LSLAEHLGRL HRLWRTVADV ELAPLGLTHP RWTALWKLLR LGDNVSQKVL 
ADALEIELAS LMRTLGQLEE QGLVERHCCT KDKRARIVSL TPAGKDVLKQ VEARIIRVRG
ELLAGISATE LGEFERIISL ISENALAKLA NSTDILE