Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4048 |
Symbol | |
ID | 1171673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4201835 |
End bp | 4202461 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637345793 |
Product | cytochrome c family protein |
Protein accession | NP_719578 |
Protein GI | 24375535 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AAATTAAAAC ATTAGCCAAA GGCATCGCGC TCATTAGCGG CTGTGCCTTG ACCTCTGTCG CCATGGCAAA TACCTCTGTA ATCCCGCCTG CGGGACAAAT CTGTGTCAGT TGTCATGGCG TTGAAGGTGA GGGCGTAGAG CCACTTGGCC CGCGCTTAGC CGGACTCTCG AAAGAATACA TCACCACCCA ATTGCAGCAT TTTCAGGCGG GAGTGCGCCA AAACGCGACC ATGATGCCGA TGGCGATGAC TCTGCAAGGT GATGGCATCG AGCAAGTGGC GAGTTATTTC TCCGCTAAAT CACCTAAAAC CGAGGTTAAG CCAGTGCTCC GCGGTACGCA TGTCACCTTT AGTGATGATA CCGCACGCTT AGCTTACCAA GGCGATTGGT CACGTGGCTT ACCCGCTTGT GTGACTTGCC ATGGCCCCTC TGGATTAGGT GGCGATTTGT TCCCGCGTTT AGCGGGTCAG CAGGCCAGCT ATATCAAGAC GCAACTGTTG GCGTGGCAAG CAGGCACTCG TAAAGGAGAT GTGGACGGCA TGATGGCCAA TGTGGCTAAC AAGCTAACCG CCGCCGAGGT GGATGCCTTA GCGAATTACT TTGCGAATAT AAAATAA
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Protein sequence | MNNKIKTLAK GIALISGCAL TSVAMANTSV IPPAGQICVS CHGVEGEGVE PLGPRLAGLS KEYITTQLQH FQAGVRQNAT MMPMAMTLQG DGIEQVASYF SAKSPKTEVK PVLRGTHVTF SDDTARLAYQ GDWSRGLPAC VTCHGPSGLG GDLFPRLAGQ QASYIKTQLL AWQAGTRKGD VDGMMANVAN KLTAAEVDAL ANYFANIK
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