Gene SO_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4047 
Symbol 
ID1171672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4200769 
End bp4201824 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content51% 
IMG OID637345792 
Productcytochrome c family protein 
Protein accessionNP_719577 
Protein GI24375534 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT CTGCAATCTT ATTATTGGTC GCCATGGGAG TGCTTACCGC TCAAGTACAA 
GCGGCGCAAG AGTTACCCGA CAAACAAGCG CCATTGCCCT CAGTCCCTAA AAATCCGGAA
CAAGCCTATC TTACGCCAAG ACCGTTAAGC GCGATTCCCG AAGGTGCCTT TGGTGATAAA
GTTCGCTTAG GTTATCAGCT ATTTGTGAAT ACCCAGCAGC TTCGGGATAA GTATGTAGGT
AACGAGCTTA ACTGCGCCAA CTGCCATATG GATGCGGGCC GCAAGGCCAA TGCGTCACCG
GTTTGGGGCG CTTATTTTGC GTATCCTGCT TATCGTAAAA AAGACGACAA AGTAAATACC
TTTCAAGAGC GGATACAAGG CTGCTTTAAC TATTCCATGA ACGGCAAAGC TCCTGCAGCA
GGTAGCCCTG AGCTTGTTGC GCTATCGGCC TATGCCTATT GGTTGGGGAT GGGTGGCTTA
ATGGATGCGG CTAATCTTGA TGGTCCTGTA CCAGAGTTAA GTGATGCCGA ATTGCTGAAA
GGTGCTAAAC GCGAGGACTT CCCACTGCCA GAAGCGCTCG CTAAAGCCAT GACAGTGGAG
CAACGCGCGA ATCTGCCCGG CCGTGGTTAT CCTGAGATCC CAAAACCAGA ACTGGCGTTC
TCACCCGAAC GTGGCAAAGC CGTGTATGTC GCCCATTGCC AAGCGTGCCA TGGCGCCGAT
GGTCAAGGCC AAGCGATTGC CGGTGTTTAC TCTCTGCCAC CATTATGGGG CCCTCAAAGT
TATAACTGGG GAGCGGGGAT GCATAGGGTC AATACTGCCG CATTTTTCAT TTATGAAAAC
ATGCCCTTTG GTAAGAGTAT GCAGCTAACG AACCAACAGG CTTGGGATGT AGCGGCTTAC
ATCAACTCCC ACGAGCGTCC ACAGGACCCA CGTAACAAGG GGGATGTGAA GCAGGCGCAG
GAGAAATACC ATAACGACAA CGACTATTAC GGTGTCGACG TCGATGGCAA AGTGCTTGGC
ACCGCTTCTT ATCCGGTGTT TCCGAAAAAG TCCTAG
 
Protein sequence
MKSSAILLLV AMGVLTAQVQ AAQELPDKQA PLPSVPKNPE QAYLTPRPLS AIPEGAFGDK 
VRLGYQLFVN TQQLRDKYVG NELNCANCHM DAGRKANASP VWGAYFAYPA YRKKDDKVNT
FQERIQGCFN YSMNGKAPAA GSPELVALSA YAYWLGMGGL MDAANLDGPV PELSDAELLK
GAKREDFPLP EALAKAMTVE QRANLPGRGY PEIPKPELAF SPERGKAVYV AHCQACHGAD
GQGQAIAGVY SLPPLWGPQS YNWGAGMHRV NTAAFFIYEN MPFGKSMQLT NQQAWDVAAY
INSHERPQDP RNKGDVKQAQ EKYHNDNDYY GVDVDGKVLG TASYPVFPKK S