Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4047 |
Symbol | |
ID | 1171672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4200769 |
End bp | 4201824 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345792 |
Product | cytochrome c family protein |
Protein accession | NP_719577 |
Protein GI | 24375534 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCTT CTGCAATCTT ATTATTGGTC GCCATGGGAG TGCTTACCGC TCAAGTACAA GCGGCGCAAG AGTTACCCGA CAAACAAGCG CCATTGCCCT CAGTCCCTAA AAATCCGGAA CAAGCCTATC TTACGCCAAG ACCGTTAAGC GCGATTCCCG AAGGTGCCTT TGGTGATAAA GTTCGCTTAG GTTATCAGCT ATTTGTGAAT ACCCAGCAGC TTCGGGATAA GTATGTAGGT AACGAGCTTA ACTGCGCCAA CTGCCATATG GATGCGGGCC GCAAGGCCAA TGCGTCACCG GTTTGGGGCG CTTATTTTGC GTATCCTGCT TATCGTAAAA AAGACGACAA AGTAAATACC TTTCAAGAGC GGATACAAGG CTGCTTTAAC TATTCCATGA ACGGCAAAGC TCCTGCAGCA GGTAGCCCTG AGCTTGTTGC GCTATCGGCC TATGCCTATT GGTTGGGGAT GGGTGGCTTA ATGGATGCGG CTAATCTTGA TGGTCCTGTA CCAGAGTTAA GTGATGCCGA ATTGCTGAAA GGTGCTAAAC GCGAGGACTT CCCACTGCCA GAAGCGCTCG CTAAAGCCAT GACAGTGGAG CAACGCGCGA ATCTGCCCGG CCGTGGTTAT CCTGAGATCC CAAAACCAGA ACTGGCGTTC TCACCCGAAC GTGGCAAAGC CGTGTATGTC GCCCATTGCC AAGCGTGCCA TGGCGCCGAT GGTCAAGGCC AAGCGATTGC CGGTGTTTAC TCTCTGCCAC CATTATGGGG CCCTCAAAGT TATAACTGGG GAGCGGGGAT GCATAGGGTC AATACTGCCG CATTTTTCAT TTATGAAAAC ATGCCCTTTG GTAAGAGTAT GCAGCTAACG AACCAACAGG CTTGGGATGT AGCGGCTTAC ATCAACTCCC ACGAGCGTCC ACAGGACCCA CGTAACAAGG GGGATGTGAA GCAGGCGCAG GAGAAATACC ATAACGACAA CGACTATTAC GGTGTCGACG TCGATGGCAA AGTGCTTGGC ACCGCTTCTT ATCCGGTGTT TCCGAAAAAG TCCTAG
|
Protein sequence | MKSSAILLLV AMGVLTAQVQ AAQELPDKQA PLPSVPKNPE QAYLTPRPLS AIPEGAFGDK VRLGYQLFVN TQQLRDKYVG NELNCANCHM DAGRKANASP VWGAYFAYPA YRKKDDKVNT FQERIQGCFN YSMNGKAPAA GSPELVALSA YAYWLGMGGL MDAANLDGPV PELSDAELLK GAKREDFPLP EALAKAMTVE QRANLPGRGY PEIPKPELAF SPERGKAVYV AHCQACHGAD GQGQAIAGVY SLPPLWGPQS YNWGAGMHRV NTAAFFIYEN MPFGKSMQLT NQQAWDVAAY INSHERPQDP RNKGDVKQAQ EKYHNDNDYY GVDVDGKVLG TASYPVFPKK S
|
| |