Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4015 |
Symbol | |
ID | 1171642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4160082 |
End bp | 4161389 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345762 |
Product | hypothetical protein |
Protein accession | NP_719545 |
Protein GI | 24375502 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGGCA CTGAGCTTGG ATCGGTGCTT GGCGATGAAG TTAAATCGGT GCTTGGCGAT GAAGTTGAAT CGGTACTTGG CGCTGAGCTT GAGCCGGTGC TTGCGCCAGC GTTTGAAGTG ACAGGCTTAT CTTGCGTACT TTTATCGTCA ATGACGTTAA TTTGGCTATC GGACTTAAGG TTTTGCATGC CCGTCTTAAC CACAAGATCG CCCTTGGCTA AACCTTCGGT CACCACCGTA TAA
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Protein sequence | MFKQRVTKQA RSACDISFTS HHSHFSKAPL FAPLPFLWVS LLACTAFSSL AADKIDIIPV TVEAVKEASF ADVVKEVGKI NAIDSAILSF NASEKISAIH FSNGDKVTKG QVIAEQDNTK AKADLDKAKS TLALAKTKLE RIEDLLIKEP FALAKQDVDE LRENVNLADA DFRQKQATMN DYLIKAPFDG QLTSFSQSIG SQIAAGTALV TLYSLNPVEV RYAISQHDFG KAQKGQGVNV TVEAYANKVF KGTVNYVAPA VDESSGRVEV HAALDNSEFK LAPGMFANIK QFYSQGVACL LVPQNSIIAN NDERFVWLVR GNNAVKQIIK LAQNTNDGYT VVTEGLAKGD LVVKTGMQNL KSDSQINVID DKSTQDKPVT SNAGASTGSS SAPSTDSTSS PSTDLTSSPS TDPSSVPNTG SSSASNTAPN AKGAQ
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