Gene SO_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4007 
Symbol 
ID1171635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4149038 
End bp4149700 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID637345755 
Producthypothetical protein 
Protein accessionNP_719537 
Protein GI24375494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCA TGAACGAATC TAACCAAACC GTCTTAGTCG GCACGGGCGC CATTATCGAA 
CTCTTGCTCA AGGGCGAATT TATTTGCCGC ACCACCAATG AAGATGGCTG GCGCGCATTG 
AAAAATAACA GCACCCGCGA GCGGGTTGAG GCGTATCTAA ACCAAATCAA CCGCACCGTG 
GCCTCGGCCG CCGAGGGTGA CGTGTTTTTC TGCGGTTATT TGCAGTTAGG CGAGAGCGAA 
CGTAAGGTGA TTTCATCGCA GTTTAAGGAT ATTTGTCAGG CACTTATCCC TATGGTGGAG 
TGGCTGGTAT TAGTGCAGGA AGCCAGCGGC CAAGATGCGC CCTTAAGCGA AGGTGCGCCA 
GTACGGTTAA CCGAGCTGCA AAGCCGGATT GAAGATACGC CCGCGTTTCG TGAGCAGTTA 
GCCAAACTCA GCCAATATCG TTTATTTGGC TCAACCAGTA CCAATAGTGA TGCGCAAATT 
AAGTTAGTGT TCAAACGCTT AGTTGAGCTT GGTTATCTGG TGCGCCCCAA CGTTGAAAAG 
CAAATTTATA TCGCTACGGG CAAGCTGGAT TATCTGTACG AAGTGATCCG CTTTATTGAC 
GAAACCGAAG GCTTAAGCCT TGAGGCGCAG GCGGAAACGG CGACCCAGCG GGATTTACTA 
TGA
 
Protein sequence
MSAMNESNQT VLVGTGAIIE LLLKGEFICR TTNEDGWRAL KNNSTRERVE AYLNQINRTV 
ASAAEGDVFF CGYLQLGESE RKVISSQFKD ICQALIPMVE WLVLVQEASG QDAPLSEGAP 
VRLTELQSRI EDTPAFREQL AKLSQYRLFG STSTNSDAQI KLVFKRLVEL GYLVRPNVEK 
QIYIATGKLD YLYEVIRFID ETEGLSLEAQ AETATQRDLL