Gene SO_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4006 
Symbol 
ID1171634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4147775 
End bp4148998 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content51% 
IMG OID637345754 
Producthypothetical protein 
Protein accessionNP_719536 
Protein GI24375493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGAGCA GTAACTTACA TCAGGCTGGG GTTAAGCTAC TCAAGCAGTT AGGCCGCCAT 
GCTGACATCA TTATGGACGC TTATTTAGCG GGCTCGCTCA ATGAGGATGC CCATGATCCC
GCCGTGGTTG AAAAACTCAA ACAGGCGGGG ATTTTATGGC GCCCAGAGCC AGATCAAGAG
CTGCGCCTTA AACGCTCGGT ACGCGCCTTG CTCGAAGAAG GCTTAAGTGA TGAGCGTAAT
CGTCAAATCG ACTCCAACGT CGGCTCGGCG CTCGCCACCA TTAAAACCTT GGCGGACCAT
TATAAAGAGG CGCGCCATAG CTCAGACTAC AGCGCCGCCG AGGCGTATCT GTCTGATTTA
AGTGAGCATG TGTATAGCTT TGCCGACAGT TTGCGCTATT CGATCCGCGT GTTGTGGGGG
CGGATCAATA ACGAGTTCGG TTATGTCGGT ACCATTAACG CTAAGATCCG CGAAAACGAA
TTAGCTCAAA GCCAAGTGTC TGAATTACTC AATGGTTTGG AGATGTTCCA GTTTAGCGAA
TTAGGCGAAA TCGCCGGTGA TATTCGTGAA CTGCGTAAAC TGCTAGTCAC CACCTTACAG
GAAACCATGA GCGAGTGTGC CCAGGAACTC AGTGTGGTGC AGGGCAGGTT GTTGGAACTT
CTCGGCCGCT TTAGGCAAAT TCGCGGCCGT ACCCGCTTGC TTAAAGGTTG GTTGCTGTAC
ACCGACTTGC ATCCGGATTA TCGCCCTGCG GATCATGTGT CCCATAAGGA AATCCCAAGC
CTTTTCAATC GCGCTGAAGT TCTGTTAGCG CCAGCTTCTG TGGATGTGCA TAACGCCAGC
CAAGAGCTTG AGTTGATGAA TATCGTCGCC CATATCAAGG CGATTAGCCG TCAGGGCGTG
ATCGAAACTG TGCGTGAGCA GGATGTCAGT GTATCGCTCA CCCAGAGTGA AGACTTTGAT
ATTCCTGATA ATCCACTCAA GCAAGCCGTA GATGCCTATT TTGTTGATGT GATTGAGTCG
GGCTTACGTC AGTCGGCGCT CGACTACTTA GCCGAAAAAG CCCTCCCATG GGATGCTGAA
AGCTGGATTT ATCAAGTGAT TGGCGGCTAT GACGGCTTAC CCGATGAGCA TAAAGCCTAT
TTTGAGTTAG AACCTTTAGG CGAGCCTCAC CCCATCTACA GCGGTAACTT TATTATCCGC
GATGTGGAAT TATGGCTCGC CTAG
 
Protein sequence
MMSSNLHQAG VKLLKQLGRH ADIIMDAYLA GSLNEDAHDP AVVEKLKQAG ILWRPEPDQE 
LRLKRSVRAL LEEGLSDERN RQIDSNVGSA LATIKTLADH YKEARHSSDY SAAEAYLSDL
SEHVYSFADS LRYSIRVLWG RINNEFGYVG TINAKIRENE LAQSQVSELL NGLEMFQFSE
LGEIAGDIRE LRKLLVTTLQ ETMSECAQEL SVVQGRLLEL LGRFRQIRGR TRLLKGWLLY
TDLHPDYRPA DHVSHKEIPS LFNRAEVLLA PASVDVHNAS QELELMNIVA HIKAISRQGV
IETVREQDVS VSLTQSEDFD IPDNPLKQAV DAYFVDVIES GLRQSALDYL AEKALPWDAE
SWIYQVIGGY DGLPDEHKAY FELEPLGEPH PIYSGNFIIR DVELWLA