Gene SO_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3994 
Symbol 
ID1171624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4132274 
End bp4133293 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content32% 
IMG OID637345744 
Producthypothetical protein 
Protein accessionNP_719524 
Protein GI24375481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTTA AAACAAAAAC GGCTCAAAAA ATCAGATCAA GGATGGTTGA TGATATTTCA 
CTAGGAGCTA TTTTGCCACC AATGGTTGTT GGGTTAATAG TTACACAAGC TGAATATGAG
AGATTATCAA GTGGTGAAGA AAAAATTACT AATTTAATTA ATCATAATAT ATCTCTAATA
GATGGAATGC AACGAACAAC AGCAATAAAG GAGTCTCTTG AAAAAAATCG TGAAATAATA
AATAGCAAAG TTAGAGTTGA ATTTTGGATC TCTCACTCCA TGAATAGTTT AATATATAGA
ATGTTAGTTT TAAATACTGG ACAGGTTCCT TGGGATATAA AGAGACAATT AGATACAATA
TATGAACCTA TTGCTCAAAA ACTAAAAGAT GATATGCCAA CACTTGACCT TAGAGTTTTA
GATGATCCCA AAAAACGCAC ATCATCTAGC CAGTATCAAA GTAGTAAATT AATAGAATAT
TACCTTTGTT TTACTACTAG AAAGGTCGAT GTAGATTTAA AAGACAAAGT TTCTGAGGAT
TTTGCACGAT TGGATACAAT AGCCGCTGCT TCAGAAAGTC AATCTCTAGA TATATTTAGC
CTTGTCATTA AAAGAATGTT GGAAATAGAT GATGAAATCT CCAGACTTAA AGATATAAGC
TCTGGGAGAT TTAAATCAGG AAAAGACCTA TTTACTAGCA TTCCTGTCGG TGCAGGATTT
GTCTCTGCAG CAGCAGAATA TATTTATGGT GTTAAGGGAT TAGATTGTAA TGAGATCAAT
GTTTCTGATA ACTTAACTGA TTTTGATGGA AGGTTAGTTA ACTTTGTCGC CAAGTTAAAA
GAAATGGATG ATTCTCAACT TGAAGAATTC TTAGAGTTTG ACCTTTTAAA TGAAAAGTTA
AGTGTAAAAT CTTCAAAAAT AGGAACATTT GAGAGAGAGT TTTTCTATAA ATCATTTGAA
GCACTATTTA AGTATTCAGA TCAAATGCCA AACTTTCAGG TATGTTGGTT GGCAAGATAA
 
Protein sequence
MPLKTKTAQK IRSRMVDDIS LGAILPPMVV GLIVTQAEYE RLSSGEEKIT NLINHNISLI 
DGMQRTTAIK ESLEKNREII NSKVRVEFWI SHSMNSLIYR MLVLNTGQVP WDIKRQLDTI
YEPIAQKLKD DMPTLDLRVL DDPKKRTSSS QYQSSKLIEY YLCFTTRKVD VDLKDKVSED
FARLDTIAAA SESQSLDIFS LVIKRMLEID DEISRLKDIS SGRFKSGKDL FTSIPVGAGF
VSAAAEYIYG VKGLDCNEIN VSDNLTDFDG RLVNFVAKLK EMDDSQLEEF LEFDLLNEKL
SVKSSKIGTF EREFFYKSFE ALFKYSDQMP NFQVCWLAR