Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3994 |
Symbol | |
ID | 1171624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4132274 |
End bp | 4133293 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637345744 |
Product | hypothetical protein |
Protein accession | NP_719524 |
Protein GI | 24375481 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCCTTA AAACAAAAAC GGCTCAAAAA ATCAGATCAA GGATGGTTGA TGATATTTCA CTAGGAGCTA TTTTGCCACC AATGGTTGTT GGGTTAATAG TTACACAAGC TGAATATGAG AGATTATCAA GTGGTGAAGA AAAAATTACT AATTTAATTA ATCATAATAT ATCTCTAATA GATGGAATGC AACGAACAAC AGCAATAAAG GAGTCTCTTG AAAAAAATCG TGAAATAATA AATAGCAAAG TTAGAGTTGA ATTTTGGATC TCTCACTCCA TGAATAGTTT AATATATAGA ATGTTAGTTT TAAATACTGG ACAGGTTCCT TGGGATATAA AGAGACAATT AGATACAATA TATGAACCTA TTGCTCAAAA ACTAAAAGAT GATATGCCAA CACTTGACCT TAGAGTTTTA GATGATCCCA AAAAACGCAC ATCATCTAGC CAGTATCAAA GTAGTAAATT AATAGAATAT TACCTTTGTT TTACTACTAG AAAGGTCGAT GTAGATTTAA AAGACAAAGT TTCTGAGGAT TTTGCACGAT TGGATACAAT AGCCGCTGCT TCAGAAAGTC AATCTCTAGA TATATTTAGC CTTGTCATTA AAAGAATGTT GGAAATAGAT GATGAAATCT CCAGACTTAA AGATATAAGC TCTGGGAGAT TTAAATCAGG AAAAGACCTA TTTACTAGCA TTCCTGTCGG TGCAGGATTT GTCTCTGCAG CAGCAGAATA TATTTATGGT GTTAAGGGAT TAGATTGTAA TGAGATCAAT GTTTCTGATA ACTTAACTGA TTTTGATGGA AGGTTAGTTA ACTTTGTCGC CAAGTTAAAA GAAATGGATG ATTCTCAACT TGAAGAATTC TTAGAGTTTG ACCTTTTAAA TGAAAAGTTA AGTGTAAAAT CTTCAAAAAT AGGAACATTT GAGAGAGAGT TTTTCTATAA ATCATTTGAA GCACTATTTA AGTATTCAGA TCAAATGCCA AACTTTCAGG TATGTTGGTT GGCAAGATAA
|
Protein sequence | MPLKTKTAQK IRSRMVDDIS LGAILPPMVV GLIVTQAEYE RLSSGEEKIT NLINHNISLI DGMQRTTAIK ESLEKNREII NSKVRVEFWI SHSMNSLIYR MLVLNTGQVP WDIKRQLDTI YEPIAQKLKD DMPTLDLRVL DDPKKRTSSS QYQSSKLIEY YLCFTTRKVD VDLKDKVSED FARLDTIAAA SESQSLDIFS LVIKRMLEID DEISRLKDIS SGRFKSGKDL FTSIPVGAGF VSAAAEYIYG VKGLDCNEIN VSDNLTDFDG RLVNFVAKLK EMDDSQLEEF LEFDLLNEKL SVKSSKIGTF EREFFYKSFE ALFKYSDQMP NFQVCWLAR
|
| |