Gene SO_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3975 
Symbol 
ID1171608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4112300 
End bp4113094 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content45% 
IMG OID637345728 
Producthypothetical protein 
Protein accessionNP_719505 
Protein GI24375462 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGCATA ATATAGAAAG CAATAAGAGG GTGACATTCT TTAGCTTTGC AAAGGGACAC 
TTGCTTGTAC CATGGCTTAT GTTTGCGGTA CTGATTTTTG GGCTTGAATG GACTGATGCA
GATATGCGCT TTGCCAGCTT ATTATTTAAC TGGCAGGGTG GGGTGGATTC ATGGCCCTTA
AGGGGACATT GGATCACTGA AAGCCTATTG CATGTGACAG GCCGTAATCT GGTCATCCTG
TTTACAGTGG TTGTCGTGGT GGCTATTGGT CTGAGTTTTC GCGTTGATAA GTTACGTTTG
TACCGCAAAG GTTTTATCTA TTTATTCACC AGTTTACTAG CCAGCGTGTT GTTGGTGCGC
ATGGGGAAAA GTATTTCTCA TATGACTTGT CCTTGGGATG TGATTGAATT TGGTGGTCGT
ATGATTCACT CCTCTCTGTT TGAACGCTTG CCTGAGGGGG CGGAGTTTGG GCAGTGTTTT
CCTGGCGGAC ATTCGAGCGG AGGTTTTGCT TGGGTGGCGA GTTATTATGT GCTCAAGCAA
TGTCATCGCC GTTATGCAAA GTTTGGCTTA CTCTTTGGGA TTGGTTTAGG CGCGATTTTT
GGGTTAGCTC AAGAGTTGCG TGGTGCACAT TTCATCAGTC ATGATTTATG GAGTTTGGCG
ATTGCTTGGA CGTCGGCAAG TCTGCTGTAC TATGGTTTTT TCCTTTACGT ACCTAAGGTT
AAAAGGATCA GTGTTGCGAA TAAAGTGAGT ATTATTAATG CCAACGTTTG CGATAAAGCC
ATCTATAAGC TGTGA
 
Protein sequence
MRHNIESNKR VTFFSFAKGH LLVPWLMFAV LIFGLEWTDA DMRFASLLFN WQGGVDSWPL 
RGHWITESLL HVTGRNLVIL FTVVVVVAIG LSFRVDKLRL YRKGFIYLFT SLLASVLLVR
MGKSISHMTC PWDVIEFGGR MIHSSLFERL PEGAEFGQCF PGGHSSGGFA WVASYYVLKQ
CHRRYAKFGL LFGIGLGAIF GLAQELRGAH FISHDLWSLA IAWTSASLLY YGFFLYVPKV
KRISVANKVS IINANVCDKA IYKL