Gene SO_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3958 
Symbol 
ID1171594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4100170 
End bp4100730 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID637345714 
Producthypothetical protein 
Protein accessionNP_719488 
Protein GI24375445 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTG TGACCCTCGC CATTATCGCC TTTTTTGGTA CTGCGCTGGT GCTGTATTGG 
CAAGTGCAGC AAAAACGCGG TGGCGATACG GATGACAGCT TGAACAACTC TGACAGACCC 
GATTACATTA TCGAAGATCT GCGCAGTATC GAGTTTAACG AGCAAGGGCA AGTCAATAGT 
CGGGTGACGG CAAAGCACAT GGAACACTAT GAGCTGAAAA ATCAAACCGA CTTTACTCAA 
CCAGTCTATC TTGTCTATCC CGACCAAGGT AAAGCAAAAT GGCAGATCCG AGCAGATCTT 
GGTCGGCTCA ACAAAGAAAC TGGCAAGGTT GTATTAGAAA ATAATGTTAT TATCGATGCC 
ATCAACCCAG GTGAACCGAT ACAAACCTTG TCCACCAGTT TTTTAGAACT CGATCTCAAC 
ACTATGATAA TGACCTCTGA CCGCATCATT TACGTCACAG GGAAAGATTT TAATATTCAA 
GGGCAAGGCC TTTATGCCGA CCTTAACGCG CAGGAAGTGC AATTGACCAG TCAGGTAGTA 
GGAACCTATG AAGCAAAATA A
 
Protein sequence
MSRVTLAIIA FFGTALVLYW QVQQKRGGDT DDSLNNSDRP DYIIEDLRSI EFNEQGQVNS 
RVTAKHMEHY ELKNQTDFTQ PVYLVYPDQG KAKWQIRADL GRLNKETGKV VLENNVIIDA 
INPGEPIQTL STSFLELDLN TMIMTSDRII YVTGKDFNIQ GQGLYADLNA QEVQLTSQVV 
GTYEAK