Gene SO_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3951 
Symbol 
ID1171588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4095270 
End bp4095923 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID637345708 
Producthypothetical protein 
Protein accessionNP_719481 
Protein GI24375438 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC GCTTATCGCG CTTTTTACTG CCGTTAGTAT GGATATTTAC AGCAACGACC 
GCATTGGCGG ATGATACTCA GATTAACACT ATGGACCCGT ACTCCATGGT GAAGTCCGTT 
GCGAACAAAA CCTTCGATCG TTTCCACAAA GACAAGGCGT TGATTGACGC GGATGCAGAC 
CATCTCAAGG TGATTGTGCG TGAAGAACTC ATGCCCTACA TCGACTATAA ATACGCTTCT 
TACAAAGTGT TAGGGCAGTA TTTAAAAGAG TCGACTGAAG ATCAACGCAA TCGTTTCGTC 
GATGCCTTCC AAGGCTATTT AGTCACAACC TATGCTCAAG CCTTTACCGA ATACACTAAC 
CAAAAAGTGG AGTTTTCGCC TGGTAGTGAT TTCAGCAATG AGAAAATTGT CGATGTAAAC 
GTCCAGATTA TCGAAGCGGG TCGTCCGCCG ATTAAGCTGT TGTTTAAAGC TCGCCGCCTC 
AAGGATGACT CTTGGAAGGC GTTTGACTTA GTTGCTGAAG GCGTCAGTTT ACTGTCTTCT 
AAGCAATCTG AAATCTCGAA TCTTATCCGC CAACAGGGGA TTGAACCGGT GATCAAGATG 
CTTGAAGAGC GCACTAAAGA CAAAGTGACT AAACAGCCAA AAGCAGGGAA GTAA
 
Protein sequence
MFKRLSRFLL PLVWIFTATT ALADDTQINT MDPYSMVKSV ANKTFDRFHK DKALIDADAD 
HLKVIVREEL MPYIDYKYAS YKVLGQYLKE STEDQRNRFV DAFQGYLVTT YAQAFTEYTN 
QKVEFSPGSD FSNEKIVDVN VQIIEAGRPP IKLLFKARRL KDDSWKAFDL VAEGVSLLSS 
KQSEISNLIR QQGIEPVIKM LEERTKDKVT KQPKAGK