Gene SO_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3940 
SymbolrplM 
ID1171578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4084824 
End bp4085252 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID637345699 
Product50S ribosomal protein L13 
Protein accessionNP_719471 
Protein GI24375428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTT TTACTGCTAC ACCAGAAACT GTAACTCGTG ACTGGTTCGT CGTTGATGCA 
GACGGCAAAA CTTTAGGTCG TATCGCTACC GAAATCGCTC TGCGTTTACG CGGTAAGCAC
AAGCCTGAAT ACACTCCTCA CGTTGACACT GGTGATTACA TCATCGTTAT CAACGCTGAG
AAAGTTACTG TTACTGGTAA CAAAGCGCAA GGCAAGACGT ACTACTCGCA CTCAGGCTTC
CCTGGTGGCA TTAAGCAAAT CAGCTTTGAA AAGCTGCAAG CTCATAAGCC AGAAATGATC
ATCGAGAAAG CAGTTAAGGG TATGTTACCA AAAGGTCCAC TGGGCCGTGC CATGTTCCGT
AAACTGAAAG TTTACGCTGG CGCAGAACAT AACCACGCTG CACAACAACC TCAAGTTCTT
GATATCTAA
 
Protein sequence
MKTFTATPET VTRDWFVVDA DGKTLGRIAT EIALRLRGKH KPEYTPHVDT GDYIIVINAE 
KVTVTGNKAQ GKTYYSHSGF PGGIKQISFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR
KLKVYAGAEH NHAAQQPQVL DI