Gene SO_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3939 
SymbolrpsI 
ID1171577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4084417 
End bp4084809 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID637345698 
Product30S ribosomal protein S9 
Protein accessionNP_719470 
Protein GI24375427 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAA CTCAGTACTA CGGCACTGGC CGTCGCAAAA CCTCTACAGC ACGCGTATTC 
GCTAAAGCTG GTAGTGGCAA CATCGTTGTA AATCAACGTC CTTTGGACCA ATACTTTGGT
CGTGAAACTG CTCGTATGGT TGTTCGTCAA CCATTAGAGT TAGTTGAAAT GACTGACAAG
CTGGACATCT ATGTAACTGT TAAAGGCGGT GGTATCACTG GCCAAGCAGG TGCAATCCGT
CACGGTATCA CTCGTGCGCT GATGCAATTA GATGAAGCTC TGCGTCCATC ATTACGTTCT
GCTGGTTTCG TTACCCGTGA CGCTCGTAAA GTTGAGCGTA AGAAAGTGGG TCTACGTAAA
GCACGTCGTA AGCCACAATT CTCTAAGCGT TAA
 
Protein sequence
MAATQYYGTG RRKTSTARVF AKAGSGNIVV NQRPLDQYFG RETARMVVRQ PLELVEMTDK 
LDIYVTVKGG GITGQAGAIR HGITRALMQL DEALRPSLRS AGFVTRDARK VERKKVGLRK
ARRKPQFSKR