Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3931 |
Symbol | |
ID | 1171570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4076330 |
End bp | 4077073 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637345691 |
Product | hypothetical protein |
Protein accession | NP_719462 |
Protein GI | 24375419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAAAAT TTATCGCACC AAGCAGCCTT TTTTTTATTT CATTTCAATC TGTTGCTCTT GTCCCTCCTG ATTATAAGGA GCCTGCGAAT GATTTTACTG CAGAAGTCGA AGCCGGTTTG CAATTGAACA TGGGTAATAC CGAATCCAGC AGTTTTAATG GTCGTACTCA ACTGATTTTC GATACCAAGC AAACAAAGCA AGAGGCAGTA TTAAAGGCTT ATTTTGCATC AGAAAAAAAC CAAACCACTT CTGAAAAATA TGAACTGCAG TTACAAAGTA ACTATAAACT CGATCGAGGT TATATTTTTG GCCGGGGAGA TTTTACGTGG GATCAGTTCG GTAGCTACAC GAAAATATCA ATATTTTCTA TTGGTTATGG TTTTGATGCA CTCAACAGTT ACCGAACAAA ACTGAGCCTC GAAGTCGGTC CTGGTTATCG TTATAACTTA CCAACCGAAT CACTTGCCGA ATCCAATCCC GAGGCTGAAA AAGACGTCAT TTTACGTACT GCGGCGAAGG TATCCCAAAA ACTTCAGGAA TACACCAGTA TCAATGCCGA TTTGACTGCC GAAGTGGGCG ATAAGAACAA TACCTTAACC TTAGACATGA ACTATAAAAA TCTTGTATTT CAAGACTGGG CTTTCAAAAT CGGCGTTAAC ATTAAATACA CAGAGGAAGT ACCTGAGGAC AGCAAGCATA CCGACACTAT CACGACCTTC AATTTACTCT ATACCTTTAG ATAA
|
Protein sequence | MLKFIAPSSL FFISFQSVAL VPPDYKEPAN DFTAEVEAGL QLNMGNTESS SFNGRTQLIF DTKQTKQEAV LKAYFASEKN QTTSEKYELQ LQSNYKLDRG YIFGRGDFTW DQFGSYTKIS IFSIGYGFDA LNSYRTKLSL EVGPGYRYNL PTESLAESNP EAEKDVILRT AAKVSQKLQE YTSINADLTA EVGDKNNTLT LDMNYKNLVF QDWAFKIGVN IKYTEEVPED SKHTDTITTF NLLYTFR
|
| |