Gene SO_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3931 
Symbol 
ID1171570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4076330 
End bp4077073 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID637345691 
Producthypothetical protein 
Protein accessionNP_719462 
Protein GI24375419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAT TTATCGCACC AAGCAGCCTT TTTTTTATTT CATTTCAATC TGTTGCTCTT 
GTCCCTCCTG ATTATAAGGA GCCTGCGAAT GATTTTACTG CAGAAGTCGA AGCCGGTTTG
CAATTGAACA TGGGTAATAC CGAATCCAGC AGTTTTAATG GTCGTACTCA ACTGATTTTC
GATACCAAGC AAACAAAGCA AGAGGCAGTA TTAAAGGCTT ATTTTGCATC AGAAAAAAAC
CAAACCACTT CTGAAAAATA TGAACTGCAG TTACAAAGTA ACTATAAACT CGATCGAGGT
TATATTTTTG GCCGGGGAGA TTTTACGTGG GATCAGTTCG GTAGCTACAC GAAAATATCA
ATATTTTCTA TTGGTTATGG TTTTGATGCA CTCAACAGTT ACCGAACAAA ACTGAGCCTC
GAAGTCGGTC CTGGTTATCG TTATAACTTA CCAACCGAAT CACTTGCCGA ATCCAATCCC
GAGGCTGAAA AAGACGTCAT TTTACGTACT GCGGCGAAGG TATCCCAAAA ACTTCAGGAA
TACACCAGTA TCAATGCCGA TTTGACTGCC GAAGTGGGCG ATAAGAACAA TACCTTAACC
TTAGACATGA ACTATAAAAA TCTTGTATTT CAAGACTGGG CTTTCAAAAT CGGCGTTAAC
ATTAAATACA CAGAGGAAGT ACCTGAGGAC AGCAAGCATA CCGACACTAT CACGACCTTC
AATTTACTCT ATACCTTTAG ATAA
 
Protein sequence
MLKFIAPSSL FFISFQSVAL VPPDYKEPAN DFTAEVEAGL QLNMGNTESS SFNGRTQLIF 
DTKQTKQEAV LKAYFASEKN QTTSEKYELQ LQSNYKLDRG YIFGRGDFTW DQFGSYTKIS
IFSIGYGFDA LNSYRTKLSL EVGPGYRYNL PTESLAESNP EAEKDVILRT AAKVSQKLQE
YTSINADLTA EVGDKNNTLT LDMNYKNLVF QDWAFKIGVN IKYTEEVPED SKHTDTITTF
NLLYTFR