Gene SO_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3925 
Symbol 
ID1171564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4072216 
End bp4073295 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content50% 
IMG OID637345685 
Productbiotin synthase 
Protein accessionNP_719456 
Protein GI24375413 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTC GCCCTAGCCC GCCGGCGCCA GTCACTCAGC CAACGTCCGT TAAACCGACG 
TTGCTTAACA CAGTGTTTTC CTATGCCGAA ATCCTTTCGC TACTTCAGGG GCAAGACGAC
GAATGGCTAT TTAGTCGCGC AAAGCTCGCC ACTGAGTTGG AATTTAATCA ACAGGTGTAT
TTACGCGGCA TTGTCGAATT TTCGAATCAC TGTCGTAACC ACTGCCATTA CTGTGGTTTA
CGCACCGAAA ATCGGCAGGT AACACGCTAT CGGCTCTCGA ACGAAGAAAT CCTTAACGCA
GTGGATAGCA TAGCCGAGCT GGGACTAGGT ACTGTGGTGC TGCAATCGGG GGATGACTTT
AACTACAGCG GCAATCGTAT TAGTACCCTT ATTACTGAAA TTAAACGTCA CCACAATCTA
GCAATCACTC TGTCACTGGG TGATCGCAAA CATCAAGAGC TGGAAAAATG GCGCGAAGCG
GGCGCAGATC GCTATTTGCT CAAAATGGAA ACCTTCGACC GCGCCCTCTT TGCTCAGTGT
CGCCCTAAAG CCAATTTTGA CGAGCGCATT GCAAGGCTCA ATTATCTTAA GTCACTGGGA
TATCAAACTG GCTCAGGAAT TATTGTCGAT TTACCGGGAA TGACGGATGC AATCTTAGCC
CGTGATATTC AGCATTTATC TGAGTTGCAG CTCGATATGC TCGCCTGCGG CCCCTTTATC
GCCCATCACC AAACGCCGTT TACGACTTCG CCCAATGGCA GCGCGCTTAA GAGTCACAGG
GTGAGCGCTA TTTTGCGACT GATGAATCCG GGGGCGAATA TTCCCGCCAC CAGTTCACTC
GACGCCCTCG ATAAGGGCGC AAGAGAGCAG GCACTCAAAC GGGGATGTAA TGTGATTATG
CCTTCCTTTA CACCAACAAA GGTCAGTGGC GATTACAGCA TCTATCCAGG AAAAAACCAG
CAGCAACACC CCGCAGCAGA GCGACTTAAC CAAGTCTGCC AGCAAATTCA ACGCCATGGG
CTAATACCCT CCTTTAGCCG TGGTGATTCA AAAAGGACTC AATATGTGTC AAGGCATTAA
 
Protein sequence
MITRPSPPAP VTQPTSVKPT LLNTVFSYAE ILSLLQGQDD EWLFSRAKLA TELEFNQQVY 
LRGIVEFSNH CRNHCHYCGL RTENRQVTRY RLSNEEILNA VDSIAELGLG TVVLQSGDDF
NYSGNRISTL ITEIKRHHNL AITLSLGDRK HQELEKWREA GADRYLLKME TFDRALFAQC
RPKANFDERI ARLNYLKSLG YQTGSGIIVD LPGMTDAILA RDIQHLSELQ LDMLACGPFI
AHHQTPFTTS PNGSALKSHR VSAILRLMNP GANIPATSSL DALDKGAREQ ALKRGCNVIM
PSFTPTKVSG DYSIYPGKNQ QQHPAAERLN QVCQQIQRHG LIPSFSRGDS KRTQYVSRH