Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3925 |
Symbol | |
ID | 1171564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4072216 |
End bp | 4073295 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345685 |
Product | biotin synthase |
Protein accession | NP_719456 |
Protein GI | 24375413 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0502] Biotin synthase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTC GCCCTAGCCC GCCGGCGCCA GTCACTCAGC CAACGTCCGT TAAACCGACG TTGCTTAACA CAGTGTTTTC CTATGCCGAA ATCCTTTCGC TACTTCAGGG GCAAGACGAC GAATGGCTAT TTAGTCGCGC AAAGCTCGCC ACTGAGTTGG AATTTAATCA ACAGGTGTAT TTACGCGGCA TTGTCGAATT TTCGAATCAC TGTCGTAACC ACTGCCATTA CTGTGGTTTA CGCACCGAAA ATCGGCAGGT AACACGCTAT CGGCTCTCGA ACGAAGAAAT CCTTAACGCA GTGGATAGCA TAGCCGAGCT GGGACTAGGT ACTGTGGTGC TGCAATCGGG GGATGACTTT AACTACAGCG GCAATCGTAT TAGTACCCTT ATTACTGAAA TTAAACGTCA CCACAATCTA GCAATCACTC TGTCACTGGG TGATCGCAAA CATCAAGAGC TGGAAAAATG GCGCGAAGCG GGCGCAGATC GCTATTTGCT CAAAATGGAA ACCTTCGACC GCGCCCTCTT TGCTCAGTGT CGCCCTAAAG CCAATTTTGA CGAGCGCATT GCAAGGCTCA ATTATCTTAA GTCACTGGGA TATCAAACTG GCTCAGGAAT TATTGTCGAT TTACCGGGAA TGACGGATGC AATCTTAGCC CGTGATATTC AGCATTTATC TGAGTTGCAG CTCGATATGC TCGCCTGCGG CCCCTTTATC GCCCATCACC AAACGCCGTT TACGACTTCG CCCAATGGCA GCGCGCTTAA GAGTCACAGG GTGAGCGCTA TTTTGCGACT GATGAATCCG GGGGCGAATA TTCCCGCCAC CAGTTCACTC GACGCCCTCG ATAAGGGCGC AAGAGAGCAG GCACTCAAAC GGGGATGTAA TGTGATTATG CCTTCCTTTA CACCAACAAA GGTCAGTGGC GATTACAGCA TCTATCCAGG AAAAAACCAG CAGCAACACC CCGCAGCAGA GCGACTTAAC CAAGTCTGCC AGCAAATTCA ACGCCATGGG CTAATACCCT CCTTTAGCCG TGGTGATTCA AAAAGGACTC AATATGTGTC AAGGCATTAA
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Protein sequence | MITRPSPPAP VTQPTSVKPT LLNTVFSYAE ILSLLQGQDD EWLFSRAKLA TELEFNQQVY LRGIVEFSNH CRNHCHYCGL RTENRQVTRY RLSNEEILNA VDSIAELGLG TVVLQSGDDF NYSGNRISTL ITEIKRHHNL AITLSLGDRK HQELEKWREA GADRYLLKME TFDRALFAQC RPKANFDERI ARLNYLKSLG YQTGSGIIVD LPGMTDAILA RDIQHLSELQ LDMLACGPFI AHHQTPFTTS PNGSALKSHR VSAILRLMNP GANIPATSSL DALDKGAREQ ALKRGCNVIM PSFTPTKVSG DYSIYPGKNQ QQHPAAERLN QVCQQIQRHG LIPSFSRGDS KRTQYVSRH
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