| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3923 |
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| Symbol | thiH |
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| ID | 1171562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4070138 |
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| End bp | 4071577 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345683 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | NP_719454 |
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| Protein GI | 24375411 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC ACGAGCATCA CTCCATTACA CTTTCGGACT ACAATCCCAA CGTCAACTTT
ATCGACGATA AAGCGATTTG GCAGACCATT GAAGACGCCA GTGATCCAAG TCGCGAGCAA
GTTCTCGCCA TTCTCGACAA GGCGCGCCAG TGTGAAGGCT TAAGCATTAG CGAGACCGCC
CTTTTGCTGC AAAACCAAGA TAAGACCTTG GATGAAATGC TTTTTAGCGT CGCCCGTGAG
ATTAAAAACA CTATTTACGG CAACCGTATT GTGATGTTTG CACCGCTGTA TGTATCGAAT
CATTGCGCCA ACAGTTGTAG TTATTGCGGC TTTAACGCCG ATAACCATGA GCTCAAACGT
AAAACCTTAA AACAGGATGA GATCCGCCAA GAGGTTGCGA TCCTTGAAGA AATGGGCCAC
AAGCGGATCC TTGCAGTCTA TGGCGAACAT CCTCGCAACA ATGTGCAAGC CATTGTTGAA
AGTATTCAAA CCATGTACAG CGTTAAGCAG GGCAAGGGCG GAGAAATACG CCGTATCAAC
GTCAACTGCG CGCCAATGAG TGTGGAGGAC TTTAAGCAAC TTAAAACCGC GGCGATAGGC
ACTTATCAAT GCTTCCAAGA AACCTATCAT CAAGACACCT ACAGCCAAGT CCATCTTAAA
GGTAAAAAAA CCGACTTTTT ATACCGCCTC TACGCCATGC ACAGGGCGAT GGAAGCAGGA
ATTGACGATG TCGGCATTGG CGCCCTCTTT GGCCTGTATG ATCATAGATT CGAGCTCCTT
GCCATGCTCA CCCATGTTCA GCAACTCGAA AAAGACTGTG GCGTTGGCCC ACACACTATC
TCCTTTCCGC GGATTGAACC CGCCCATGGC TCTGCTATCA GTGAAAAGCC GCCCTATGAG
GTCGATGATG ACTGCTTTAA GCGCATTGTT GCCATCACTC GCCTTGCCGT GCCTTATACA
GGGTTAATTA TGAGCACGCG GGAAAGTGCA GCGCTGCGCA AAGAACTATT AGAACTCGGG
GTTTCACAAA TCAGCGCAGG CTCGCGTACC GCGCCGGGTG GATATCAAGA CAGCAAACAA
AATCAACATG ATGCCGAGCA ATTCAGCCTT GGTGACCACC GAGAAATGGA CGAAATCATC
TATGAATTAG TCACCGACTC GGATGCCATC CCCTCCTTCT GCACTGGCTG TTACCGCAAA
GGGCGAACTG GCGATCATTT TATGGGATTA GCCAAACAGC AGTTTATTGG TAAATTCTGC
CAGCCCAATG CATTGATCAC CTTTAAGGAA TATTTGAACG ATTACGCCAG TGAAAAGACC
CGCGAGGCTG GCAATGCGCT GATAGAGCGA GAGCTGGCTA AAATGAGCCC GTCACGGGCA
CGCAATGTGC GCGGCTGTTT GCAAAAAACC GATGCGGGTG AACGGGATAT CTATCTGTAA
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| Protein sequence | MSTHEHHSIT LSDYNPNVNF IDDKAIWQTI EDASDPSREQ VLAILDKARQ CEGLSISETA
LLLQNQDKTL DEMLFSVARE IKNTIYGNRI VMFAPLYVSN HCANSCSYCG FNADNHELKR
KTLKQDEIRQ EVAILEEMGH KRILAVYGEH PRNNVQAIVE SIQTMYSVKQ GKGGEIRRIN
VNCAPMSVED FKQLKTAAIG TYQCFQETYH QDTYSQVHLK GKKTDFLYRL YAMHRAMEAG
IDDVGIGALF GLYDHRFELL AMLTHVQQLE KDCGVGPHTI SFPRIEPAHG SAISEKPPYE
VDDDCFKRIV AITRLAVPYT GLIMSTRESA ALRKELLELG VSQISAGSRT APGGYQDSKQ
NQHDAEQFSL GDHREMDEII YELVTDSDAI PSFCTGCYRK GRTGDHFMGL AKQQFIGKFC
QPNALITFKE YLNDYASEKT REAGNALIER ELAKMSPSRA RNVRGCLQKT DAGERDIYL
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