Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3913 |
Symbol | |
ID | 1171553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4058143 |
End bp | 4058817 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345674 |
Product | putative hydroxylase |
Protein accession | NP_719444 |
Protein GI | 24375401 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTG AAATTCCGAA TGTTTTTTCT AAACAAGAAG TCAATCAGCT AAGGGAGCAG CTCGATGCCC GCACTTGGAT TGATGGCAAT CAGACCTCAG GCATGATGGC GAGTACCCGC AAACGTAATC AGCAGTTAGA CAAAGATGAT CCTGTAGCAC TTCAAATCGG TGAGCTGATC ATGGCGCGCC TCTTGGCCCA TCCTTTATTT GTGTCGGCGG CGCTGCCGTT ACAGTTTTAT CCTCCCTTGT TTAATCGTTA TCAAGGTGGA GATACCTTTG GTTATCATAT TGATAACGCG ATCCGCTCGA CGAGCGATGG CATGGTGCGT ACTGATCTTT CTGCAACCTT ATTTTTAAGT GAGCTAAATG CTTACGAAGG CGGTGAGCTG GTGATCCAAG ATACCTATGG CCAGCAGAGT ATTAAGCTGG CGGCGGGATC TTTAGTGTTA TATCCGTCAA CGAGTTTGCA TCAGGTTACT CCTGTCACAT CCGGTGAACG TACCAGCGCG TTTATGTGGT TACAGAGCAT GGTTCGCGAT GAAGGGCAGC GCCGCTTGTT ATTTCAACTC GATCAATCAA TTCAAACACT CACGGCACAG CAGGCTGCAG AGCAAGAGCT GTTTAATCTG ACGGGGGTTT ACCATAACTT GCTTAGGCGT TGGAGTGAGT TATAG
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Protein sequence | MLIEIPNVFS KQEVNQLREQ LDARTWIDGN QTSGMMASTR KRNQQLDKDD PVALQIGELI MARLLAHPLF VSAALPLQFY PPLFNRYQGG DTFGYHIDNA IRSTSDGMVR TDLSATLFLS ELNAYEGGEL VIQDTYGQQS IKLAAGSLVL YPSTSLHQVT PVTSGERTSA FMWLQSMVRD EGQRRLLFQL DQSIQTLTAQ QAAEQELFNL TGVYHNLLRR WSEL
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