| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3912 |
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| Symbol | |
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| ID | 1171552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4056905 |
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| End bp | 4057912 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345673 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | NP_719443 |
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| Protein GI | 24375400 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGAAAA ATAATATTAA TGATAGCAAA AATCTCGACC GCACCTTTTC CATTGCACCT
ATGCTGGATT GGACGGACCG TCATTACCGT TATTTTGCTC GTTTAATGTC GGCCAATGCT
TTGTTGTATA CCGAGATGGT TACCACCGGC GCGATATTAC ATGGCCGTGG TGATTACCTT
ACCTATAACC AAGAAGAACA TCCTCTTGCA TTGCAATTAG GCGGCTCTAA TCCTGTCGAA
CTTGCGCGCT GCGCGAAACT GGCGGCTGAG CGCGGTTATG ATGAAGTGAA TCTCAATGTG
GGCTGTCCTT CTGATCGCGT GCAAAACGGC CGCTTTGGTG CTTGTTTAAT GGCAGAACCT
GAGCTGGTGG CAGAGTGTGT CGATGCCATG AAGCAAGTGG TTGATATTCC TGTGACGGTA
AAAACGCGCA TCGGTATCGA TGAGCAAGAT AGCTATGAGT TTTTAACTCA CTTTATTGAT
ACTGTTATGG CTAAGGGCTG CGGTGAGTTT ATTATCCATG CGCGCAAGGC CTGGTTGCAG
GGCTTAAGTC CGAAGGAAAA TCGCGAGATC CCACCATTAG ACTACGACCG TGTGTATCAG
CTCAAACGTG ATTATCCAGC ACTTAACATC AGCATTAATG GTGGGATCAC CAGTCTCGAA
CAGGCTCAAA CCCATTTGCA GCATTTAGAT GGGGTAATGG TGGGGCGTGA GGCTTACCAA
AATCCTTACA TGTTGGCGCA GGTTGACCAA GTGCTGTGTG GTAGCACAAA AGCGGTGATG
AGTCGTGAAG CCGTGATTGA GGCGATGTTG CCTTATATCG AAGCTCATTT ACAGGTGGGC
GGGCGCTTAA ATCATATCAC TCGGCATATG ATTGGTTTAT TCCAAGGCCT GCCCGGTGCG
CGCGCTTGGC GTCGTTATTT GAGCGAAAAT GCCCATAAAA ATGGCGCTGG TATTGAGGTA
GTTAAATTGG CCTATCAGAG CGTGCAAACC GATTTGGTTG CGCAATAA
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| Protein sequence | MLKNNINDSK NLDRTFSIAP MLDWTDRHYR YFARLMSANA LLYTEMVTTG AILHGRGDYL
TYNQEEHPLA LQLGGSNPVE LARCAKLAAE RGYDEVNLNV GCPSDRVQNG RFGACLMAEP
ELVAECVDAM KQVVDIPVTV KTRIGIDEQD SYEFLTHFID TVMAKGCGEF IIHARKAWLQ
GLSPKENREI PPLDYDRVYQ LKRDYPALNI SINGGITSLE QAQTHLQHLD GVMVGREAYQ
NPYMLAQVDQ VLCGSTKAVM SREAVIEAML PYIEAHLQVG GRLNHITRHM IGLFQGLPGA
RAWRRYLSEN AHKNGAGIEV VKLAYQSVQT DLVAQ
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