Gene SO_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3908 
Symbol 
ID1171548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4055183 
End bp4055920 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID637345669 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionNP_719439 
Protein GI24375396 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATA TACAGGTTCG GGATGATCAG GGCGTTCGCA TTATCAGCTT TAATCGCCCA 
GATAAACGTA ATGCACTTGA TCTTAATATG TATAAACAAC TGACAGAATA CCTGATCGAA
GGTGAAGCAG ACAACGACAT TCGTGCCTTT ATGCTCCATG GCGAAGATAA TTGTTTCACC
TCGGGTAATG ATGTTGCGGA CTTTTTAAAA AATAGTGACT TAGGTCCAAA TCACCCCGCT
GTACGCTTTT TATTTTGCCT ATTGGAACTC AAAAAACCGC TGGTTGCTGC CGTCTCTGGT
GCCGCGGTAG GCATTGGCAC CACTGTGCTA CTGCACTGTG ATTTAGTCTA TGCCGATAAT
TCGGCAAAGT TTCAACTGCC CTTTGTCAAT TTAGCCTTAG TCCCCGAAGC GGGTGCGAGT
CTACTGTTAC CCGAGTTAGT GGGTTATCAA AAAGCGGCTG AACTTTTGCT GCTCGGAGAA
AGTTTTGATG CCAATACTGC CCATAGGCTG AATATCATTA ATGATGTTAT CGCCCAAGAA
GAGTTATTAG CTTATGCCTT TAACCAAGCG AAAAAACTGG CAAATCAGCC ACCACAGGCG
CTGCAAATTA CCCGTCAATT AATGCGTCCA CATAAAAACC GCGTACAACA CCAAATGCAT
CAAGAGTTAG AGCAATTTGG CGCAAGACTT AAAAGTGATG AAGCCAAAGC AAGATTTCAA
GCTTTTCTTA AAAAGTGA
 
Protein sequence
MSHIQVRDDQ GVRIISFNRP DKRNALDLNM YKQLTEYLIE GEADNDIRAF MLHGEDNCFT 
SGNDVADFLK NSDLGPNHPA VRFLFCLLEL KKPLVAAVSG AAVGIGTTVL LHCDLVYADN
SAKFQLPFVN LALVPEAGAS LLLPELVGYQ KAAELLLLGE SFDANTAHRL NIINDVIAQE
ELLAYAFNQA KKLANQPPQA LQITRQLMRP HKNRVQHQMH QELEQFGARL KSDEAKARFQ
AFLKK