Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3908 |
Symbol | |
ID | 1171548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4055183 |
End bp | 4055920 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637345669 |
Product | enoyl-CoA hydratase/isomerase family protein |
Protein accession | NP_719439 |
Protein GI | 24375396 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATA TACAGGTTCG GGATGATCAG GGCGTTCGCA TTATCAGCTT TAATCGCCCA GATAAACGTA ATGCACTTGA TCTTAATATG TATAAACAAC TGACAGAATA CCTGATCGAA GGTGAAGCAG ACAACGACAT TCGTGCCTTT ATGCTCCATG GCGAAGATAA TTGTTTCACC TCGGGTAATG ATGTTGCGGA CTTTTTAAAA AATAGTGACT TAGGTCCAAA TCACCCCGCT GTACGCTTTT TATTTTGCCT ATTGGAACTC AAAAAACCGC TGGTTGCTGC CGTCTCTGGT GCCGCGGTAG GCATTGGCAC CACTGTGCTA CTGCACTGTG ATTTAGTCTA TGCCGATAAT TCGGCAAAGT TTCAACTGCC CTTTGTCAAT TTAGCCTTAG TCCCCGAAGC GGGTGCGAGT CTACTGTTAC CCGAGTTAGT GGGTTATCAA AAAGCGGCTG AACTTTTGCT GCTCGGAGAA AGTTTTGATG CCAATACTGC CCATAGGCTG AATATCATTA ATGATGTTAT CGCCCAAGAA GAGTTATTAG CTTATGCCTT TAACCAAGCG AAAAAACTGG CAAATCAGCC ACCACAGGCG CTGCAAATTA CCCGTCAATT AATGCGTCCA CATAAAAACC GCGTACAACA CCAAATGCAT CAAGAGTTAG AGCAATTTGG CGCAAGACTT AAAAGTGATG AAGCCAAAGC AAGATTTCAA GCTTTTCTTA AAAAGTGA
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Protein sequence | MSHIQVRDDQ GVRIISFNRP DKRNALDLNM YKQLTEYLIE GEADNDIRAF MLHGEDNCFT SGNDVADFLK NSDLGPNHPA VRFLFCLLEL KKPLVAAVSG AAVGIGTTVL LHCDLVYADN SAKFQLPFVN LALVPEAGAS LLLPELVGYQ KAAELLLLGE SFDANTAHRL NIINDVIAQE ELLAYAFNQA KKLANQPPQA LQITRQLMRP HKNRVQHQMH QELEQFGARL KSDEAKARFQ AFLKK
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