Gene SO_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3905 
Symbol 
ID1171545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4052946 
End bp4053641 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID637345666 
Producthypothetical protein 
Protein accessionNP_719436 
Protein GI24375393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTT CAGCCCACGC GGCAACAGTG GTTGGTTTTA AAATTGGTGG TGATTACTGG 
CGTGCTGATA CCAGCGGTAC CTTTTCTGAT AAAGGTCAGC CACAACAAGG TTTTGACTAC 
AGCTCATCTG CGCAAGGTAG CTATTGGTTT GCCGTTGAGC ATCCACTACC TTTTGTGCCA 
AATCTTAAAA TCCGTGAAAA CAGCCTTGAT CAAAAAGGTA GTTTGGCGAA TGCGGATTTC 
AGCTTCAATG GCCACGATTT TAAAGGTAAT GTGACCAGTT ATACCGATCT GAGCAACACC 
GATTTTGTGT TGTATTACGA GCTGCTGGAT AACGATATTT TATCTTTTGA TTTGGGCGCA 
GCTTATAAAC TGATGAACGG CTCACTGCGA GTGCAAGATC CCGGTCACCC TGAAGAGAAA 
GATGTGGATG GTGGCATTGT AATGGGGTAC GCCAGCACCC ATGTAAGCAT GCCGGGTTTA 
GGCTTATTTG GCTTTGCAGA TTTAATGCTT GGAGTGAATG AGTCTAATGT ACATGATTAT 
GCGATCGGTT TAGGCTGGCA GTTTGATGGC GCAGCAGTTG ATACCCGTGT GCGCGTGGGT 
TACCGCGAGT TTGCCTTTGA TGTGAATAAT TTCTCAGGCA TTAGTGCTGA TACTAAGTTT 
GATGGCTATT TCGCTGGTGT TGAAATTGAT TTCTAA
 
Protein sequence
MVTSAHAATV VGFKIGGDYW RADTSGTFSD KGQPQQGFDY SSSAQGSYWF AVEHPLPFVP 
NLKIRENSLD QKGSLANADF SFNGHDFKGN VTSYTDLSNT DFVLYYELLD NDILSFDLGA 
AYKLMNGSLR VQDPGHPEEK DVDGGIVMGY ASTHVSMPGL GLFGFADLML GVNESNVHDY 
AIGLGWQFDG AAVDTRVRVG YREFAFDVNN FSGISADTKF DGYFAGVEID F