Gene SO_3903 details

Gene Information

• Locus tag: SO_3903
• ID: 1171543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4050712
• End bp: 4051314
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637345664
• Product: MutT/nudix family protein
• Protein accession: NP_719434
• Protein GI: 24375391
• COG category: [L] Replication, recombination and repair; [R] General function prediction only
• COG ID: [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes
• TIGRFAM ID: [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCTC AGGTTTTTTC GCAAACAGAT ATTGAAATCC TCGAAAAAAA ATCACTATAT 
CAAGGCTTTT TTGCCTTAGA GCAATTTACC TTCAAACATA AGCTTTTTGC CGGAGGCTGG 
AGTCAGCCTG TCACTCGTGA GGTCTTTGAG CGTGGCCATG CGGTCGTTGT GCTACCCTAT 
GATCTCAAGC GTGATAAAAT TGTGTTGATT GAGCAAGTGC GTTTTCCTGC ATTAGCAACC 
ACTAAATCCC CTTGGCTTAT GGAGTTAGTC GCGGGTATGA TTGCGCCCGA CGAAATGCCA 
CTGGATGTCG CGCACCGTGA ATTGTTAGAA GAAACTGGCT TGACCGCTAG CAACATCCAT 
TTTGTGAACA GTTACCTTGC AAGCCCTGGT GGCAGTACAG AACGTTTCTA CTTTTATTGG 
GCTGAAGTAG ATTCATCACA GGCACAAGGT TTGCACGGAT TAGCTGACGA ACACGAAGAT 
ATTCGATTAC ATGTTGTAGA CCGTGAGGCT GCCTATAACG GGGTCGTTAC TGGCGAAATA 
GACAATGCAT CGACCGTCAT TGGATTGCAG TGGTTGCAAT TAAACTATCA GCAACTGGTT 
TAG 

 

Protein sequence

MKPQVFSQTD IEILEKKSLY QGFFALEQFT FKHKLFAGGW SQPVTREVFE RGHAVVVLPY 
DLKRDKIVLI EQVRFPALAT TKSPWLMELV AGMIAPDEMP LDVAHRELLE ETGLTASNIH 
FVNSYLASPG GSTERFYFYW AEVDSSQAQG LHGLADEHED IRLHVVDREA AYNGVVTGEI 
DNASTVIGLQ WLQLNYQQLV