| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3897 |
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| Symbol | parC |
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| ID | 1171537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4043363 |
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| End bp | 4045639 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345658 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | NP_719428 |
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| Protein GI | 24375385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG CAATCAAGTT AAGCTTGGAT GGCGTAGAGC AGATGCCATT GCGGCGCTTT
ACCGAAGAAG CTTATCTGAA TTATTCCATG TACGTCATCA TGGACCGTGC CTTACCCCAT
ATCGGTGATG GCCTTAAACC CGTGCAGCGA CGGATTATTT ATGCCATGAG CGAGCTCGGT
TTATCCGCGC AATCAAAGCA TAAAAAATCG GCCCGTACAG TGGGTGACGT ATTAGGTAAG
TACCATCCCC ATGGTGATAG CGCCTGTTAT GAGGCGATGG TACTAATGGC GCAGCCATTT
TCCTATCGCT ATCCGCTGGT TGATGGTCAA GGAAACTGGG GCGCGCCAGA CGATCCTAAG
TCATTCGCTG CAATGCGTTA TACCGAGGCT CGCCTGTCGA AGTTTTCTGA GGTGTTATTA
TCTGAGCTAG GACAAGGTAC AGTTGAATGG GGCGCGAACT TCGATGGCAC TCTAAAAGAA
CCCAAAGTAC TGCCGGCACG CTTACCCCAT ATTCTACTCA ATGGTATTAC AGGCATTGCG
GTGGGGATGG CGACGGATAT TCCGCCGCAT AATGTCAGAG AGTTGGTGAA TGCCTGCGTC
GCGCTTTTAG ATGAGCCTAA ACTCGACCTT GAACAGTTGA TGGCCTACGT GCCGGGGCCG
GATTATCCTA CTGAAGCTGA GATTATTACT CCCGCTGCCG ATATTGCCAA AATCTATGAA
ACGGGGCGGG GTTCCTTAAA AGCCCGTGCC GTTTACAGTG TGGAGGCGGG GGAGATTGTC
ATCACTGCAC TGCCGCATCA GGCGAGTAGT GGTAAGATTT TAGAACTGAT TGCAGCGCAA
ATGCAGGCGA AAAAATTGCC TATGGTTGCT GACTTGCGTG ATGAGTCTGA CCATGAAAAT
CCTGTTCGCT TAGTGATTGT TCCGCGCTCT AACCGTGTTG ATTGCGATCA ACTCATGGCT
CACTTATTTG CGACCACAGA TCTTGAGAAA AGTTTTAGGG TAAACCTTAA CGTGCTTGGC
CTTGATGGTC GTCCACGGGT AAAAGGCTTA AAAGACTTAC TCACCGAATG GTTAGAATTC
CGTGTCGATA CCGTAAGACG TCGCCTCGAA TATCGTTTAG ATAAAGTGCT GGCGCGCTTA
CATATTCTTG AAGCATTAAT GATCGCTTTC CTCAATATTG ATGAAGTGAT TGAGATCATT
CGCTTTCACG ATGAGCCCAA AGCGGAATTG ATGGCGCGTT TTAACCTGAC CGATAAGCAG
GCTGAGGCCA TCCTCGAGTT AAAATTACGC CATTTAGCTA AGCTAGAAGA ATTTAAGATT
AAGGCTGAGC AGGACGAGCT CGAAGCTGAA CGTGAAAAGT TAGAGCAATT ATTAGGTTCT
GAGCGCCGCT TAAAAACCTT AATTAAGAAA GAGTTAATCC AAGATGGTGA GACCTATGGC
GATGACCGTC GTTCTCCTAT CGTCGAGCGT CATGAGTCTA AAGCCTTAAC CGAGCAAGAG
CTGACACCGA GTGAGCCTGT GACAGTGGTG TTATCCGATA AAGGCTGGGT GCGTAGTGCT
AAAGGTCATG ATATTGATGC GGAGTCTTTA TCCTATAAGG CGGGTGATCA ATATCTGTGT
AGTGCCATGG GACGGAGTAA TCAGGCGGCG GTGTTTATTG ACTCATCCGG TCGCGCCTTT
GCCACCGATA GTCATAGTCT GCCATCGGCT CGAAGCCAAG GTGAGCCAAT TACCACCCGC
TTTAATATGG CGCCTGGTGA AACCATGCAG CATGTTATTT TGGGTGAAGA TGAACAGTGC
TTCCTACTGG CGACTGATGC AGGTTATGGT TTTATATGTA CTTTCAATGA CATGGTATCC
CGTAATAAGG CGGGTAAAGC CCTATTGAGC TTACCGACGA ATGCCAAATC TTTACCGCCT
AAACCGATTG ACCGTAATCG GGAGATGTCT ATTCTGGCCA TCACCAATGA AGGTCGTATG
CTATTGTTTT CATTGGAAGC ATTGCCACAA TTATCTAAGG GTAAAGGTAA TAAGATTATC
GGTATACCAA GCGAACGCGC TAAAAACCGT GAAGAGTTAA TGACACATTT ACAACTTGTT
CCTGCCGATA CCTCCGTCAC CCTATGGGCG GGTAAACGTA AACTCACGCT AAAACCAAGT
GATTTAGAGC ATTATCGTGG TGAGCGTGGC CGCCGTGGTG CCAAGTTGCC GCGCGGATTA
CAGCGCGTCG ATAGCATGGA ATTAGGCGAA GGTGCTGAAC CTATACCAAG CATTTAA
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| Protein sequence | MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA
VGMATDIPPH NVRELVNACV ALLDEPKLDL EQLMAYVPGP DYPTEAEIIT PAADIAKIYE
TGRGSLKARA VYSVEAGEIV ITALPHQASS GKILELIAAQ MQAKKLPMVA DLRDESDHEN
PVRLVIVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KDLLTEWLEF
RVDTVRRRLE YRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFNLTDKQ
AEAILELKLR HLAKLEEFKI KAEQDELEAE REKLEQLLGS ERRLKTLIKK ELIQDGETYG
DDRRSPIVER HESKALTEQE LTPSEPVTVV LSDKGWVRSA KGHDIDAESL SYKAGDQYLC
SAMGRSNQAA VFIDSSGRAF ATDSHSLPSA RSQGEPITTR FNMAPGETMQ HVILGEDEQC
FLLATDAGYG FICTFNDMVS RNKAGKALLS LPTNAKSLPP KPIDRNREMS ILAITNEGRM
LLFSLEALPQ LSKGKGNKII GIPSERAKNR EELMTHLQLV PADTSVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSMELGE GAEPIPSI
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