| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3896 |
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| Symbol | |
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| ID | 1171536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4042055 |
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| End bp | 4043164 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637345657 |
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| Product | outer membrane porin, putative |
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| Protein accession | NP_719427 |
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| Protein GI | 24375384 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTC GCATCAGTAT TAGCACTGGC CTCATTCGGC
GCGCTAGCCG AAGGCCCAAG CTTCTACGGT CGTTTAGAGC TTGCATTAAC CAATACTGAA
ACAGGTGCAA CTCTGCAATC TGGCACTAAC GGTGTTGACA CTAAAAACTA TGCTGATGAA
AACAATGGCG GCACTTATTT AGAAAACAAC TTCTCTCTGT TAGGAGTTAA AGGTTCTGAA
AAGATCGCCA ACGGTTATGA TGTTGTTTAT CAAATGGAAT TCCAAGTTGA AAACACTTCA
GGTTCTGGTG ATGTGTTTAA AGCTCGTAAC ACTTTCCTCG GTTTAAAAAC TAACGCAGGT
ACTGTGTTAG TGGGTCGTAA TGACACTGTA TTTAAACAAG CTGAAGGTAA CGTAGACGTA
TTTGGTAACA CCAACGCGGA TATCGACCGT TTAGTTGGCG CACAAACCCG TAGCGCAGAT
GGCGTATGGT ACTATTCACC AAAAATCGCT GATTTAGTGA CCTTAAACGC CACTTACCTG
TTCGATGATA ACGACACTAC TGCAAAAACC AACGAAAGCT TATACGCTCT GAGTGCAACT
CTGGGTGATA GCAAGTTCAA AGATCAAAAC TACTATTTAG CGGTTGCCTA TAACAAAGGT
ATTGCGGGTA TTGATGCATA CCGTGGTGTG GCACAAGTTA AATTTGGCGA TTTCAAAGTG
GGTGGTTTAT TCCAAAACTC TGAAAGCGTA ACTAATAGCT CAGTAGATGG TAACACTTAC
TTTGTAAACG TCGTTTACAC TTTAAACGGT GTTAACCTGA AAGCCGAATA CGGTGTTGAC
GAAGCAGGCT TTGGTAACTA CTACAACAAC GTAAATAAAT ATACTGAAGT ACAAATTATT
GATGGCAAAC CAACTGTTGT AGCAAAATCA ACAACTGGTA CCGATATCAG CGTACAAAAC
TTCAACGTGG GTGCTGACTA CCGCTTCTCT AAATCAACTA TGGTATACGG CCAATATTCA
ATGTACCGTG GTGATCATGT CGTAGCAGGT AACAAAGTAG ACCTTCAAGA CGACAACGTA
TTCTCTGTTG GTGTACGTTA CGATTTCTAA
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| Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTNTE TGATLQSGTN GVDTKNYADE
NNGGTYLENN FSLLGVKGSE KIANGYDVVY QMEFQVENTS GSGDVFKARN TFLGLKTNAG
TVLVGRNDTV FKQAEGNVDV FGNTNADIDR LVGAQTRSAD GVWYYSPKIA DLVTLNATYL
FDDNDTTAKT NESLYALSAT LGDSKFKDQN YYLAVAYNKG IAGIDAYRGV AQVKFGDFKV
GGLFQNSESV TNSSVDGNTY FVNVVYTLNG VNLKAEYGVD EAGFGNYYNN VNKYTEVQII
DGKPTVVAKS TTGTDISVQN FNVGADYRFS KSTMVYGQYS MYRGDHVVAG NKVDLQDDNV
FSVGVRYDF
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