| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3890 |
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| Symbol | |
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| ID | 1171532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4035586 |
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| End bp | 4037175 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345653 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_719421 |
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| Protein GI | 24375378 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGCA CTACTGTCAA AAAGGGCACA ATGGGAAATG GTATTATCTT TGCCCCCATG
CTGTTACTTT TATATCCACT CTACAGTTTA GTCACCAGCG GATACTTGCT TGCAACGCTG
TGCTTAATTG CGCTAGCAGT CATTCTTATT TTTAACATTA ATAAACTGAT CCGTCATTTG
AGACAACTCG AACGTGCCGC CCATCACTTA GGCGAGGGTG ATTTGAGTTA TCAGCTTGAC
GAAAAAGATG CAGGCGTCTT TAACAGCGTC GTACATAGCA TTAATCGTAT GGGCGAAGAT
GTAAGCCGTA CGATTTTATC CTTAATCGAT ACCAGTGAAT GGATGAAGAA AGTCGCGACG
GATATTAAAA CGATCAGTGA GCAGGCCAAA CAAGGCGTAC TTGAGCAGGA ACGCCAGACT
GAGCTTGCTG CAACGGCGAT GACGCAGATG GTTTCAACAG TACAAGAAGT CTCGCAAAAT
GCCGCAAGTA CCGCGCAAGC CGCCGATATT GCTCAAAATT CTGCGAAGCA TGGCGATAAA
ATAATGGGTC ATATCGTAAA TAAAATTAAC GATATGACCA CACAAATCCA TCAAACAAAG
TCGGTTATTG AGCATCTTGC CGCTGATACT AATAGTATTA GCAGCATTAT TGAAACCATT
TCCCAAGTGG CAGAGCAAAC TAACCTGCTC GCGCTCAATG CGGCGATTGA GAGCGCCAGA
GCGGGTGAGC ATGGTCGTGG ATTTGCTGTC GTTGCTGATG AAGTCCGAAA TTTGGCAAAA
CGCACCTCAG AAGCAACCGC CGAAATTCAA CAGCAGATAA CGGCATTGCA AAAGGGCGCC
CAACAAGGGG TGGAGGTGAT GTTAAAAAAC GTCACTATCG CCGACGAAAC CGCCTTGATG
GTAGAGCAAG CCCATAAATC TCTGGGTGAA ATTGTCACTC ACGTTGAAAG CATTACGGAT
ATGTCCCATC AGATCGCCAC CGCATCGGAA GAACAACATG CCGTTGCTGA GGAAATTAAC
AAAAACATCA GCGCGATGGC CGAACTGGCA TTGAAGAATG CTCATCATAC GAATCTGACC
AATTTATCCA GTCTCAAGGT TTACAATATG TCTCAGGAGA TTGGCTCGCT GCTGCATCGT
TTCCATGTGG ATAAACAGCT GTTTACCTCT AGCCAAGCCC AAAACAAATT GTTTGTGAAA
TGGGGGCCAG AGCTTGATAT TGGAATGTCT GAGATTAACC GTCAGCATCA ACGTTTAGTT
TCCTTAGTTA ACGAATTGCA CCGTACCTTA AGCGAAGCCT ATGGCCTTGA GGCGATCAAA
CGAATCGTTC AAGGACTGGT GGATTACACC GCGAATCATT TTTCCTATGA AGAAGAGCTT
TTTGCTCGTT TTGGTTATCC ACAAACCAAT GGACATAAAG AAAAGCATGC TCAACTAGTT
GGTCAAGTTC TTGATTTTCA AAAGCGGGTT GCCAGAGGTG AAGATGTGGC CGATGAGTTA
ATGGCATTCT TAAAATCTTG GTTAGTGAAC CATATTCAAA AAAGTGATAA GGAATATGCC
CAATTTTTAC TTGCCCATGG TGCAGAGTAG
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| Protein sequence | MASTTVKKGT MGNGIIFAPM LLLLYPLYSL VTSGYLLATL CLIALAVILI FNINKLIRHL
RQLERAAHHL GEGDLSYQLD EKDAGVFNSV VHSINRMGED VSRTILSLID TSEWMKKVAT
DIKTISEQAK QGVLEQERQT ELAATAMTQM VSTVQEVSQN AASTAQAADI AQNSAKHGDK
IMGHIVNKIN DMTTQIHQTK SVIEHLAADT NSISSIIETI SQVAEQTNLL ALNAAIESAR
AGEHGRGFAV VADEVRNLAK RTSEATAEIQ QQITALQKGA QQGVEVMLKN VTIADETALM
VEQAHKSLGE IVTHVESITD MSHQIATASE EQHAVAEEIN KNISAMAELA LKNAHHTNLT
NLSSLKVYNM SQEIGSLLHR FHVDKQLFTS SQAQNKLFVK WGPELDIGMS EINRQHQRLV
SLVNELHRTL SEAYGLEAIK RIVQGLVDYT ANHFSYEEEL FARFGYPQTN GHKEKHAQLV
GQVLDFQKRV ARGEDVADEL MAFLKSWLVN HIQKSDKEYA QFLLAHGAE
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