Gene SO_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3888 
Symbol 
ID1171531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4034712 
End bp4035044 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content46% 
IMG OID637345651 
Producthypothetical protein 
Protein accessionNP_719419 
Protein GI24375376 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAT GGTATGAATT AAGCAAAAGT AGTAACGATC AATTTAAGTT TGTGCTTAAG 
GCTGGTAACG GAGAAGTCAT CCTCACCAGC GAACTCTACA CGGGTAAGAG TGGTGCCATG
AATGGTATCG AATCCGTTCA AACCAACTCC CCTATCGAAG CCCGATATGC CAAAGAAGTG
GCGAAAAACG ATAAGCCGTA CTTCAACCTA AAAGCCGCGA ACCATCAGAT CATTGGCACC
AGCCAAATGT ATTCGAGTAC CGCAGCAAGG GACAACGGGA TCAAGTCGGT AATGGAGAAT
GGCAAAACCA CGACGATTAA AGATCTAACC TAG
 
Protein sequence
MSGWYELSKS SNDQFKFVLK AGNGEVILTS ELYTGKSGAM NGIESVQTNS PIEARYAKEV 
AKNDKPYFNL KAANHQIIGT SQMYSSTAAR DNGIKSVMEN GKTTTIKDLT