| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3885 |
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| Symbol | |
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| ID | 1171528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4031563 |
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| End bp | 4033605 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637345648 |
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| Product | AAA family ATPase |
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| Protein accession | NP_719416 |
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| Protein GI | 24375373 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGC GTGCAAAATC ACCCCGTAAA TGGCGCGCCA ATCATTGCCA CTACCTCGCC
TCGCAGTTGA GTGAAGCATT GATGCTTGCC GCCATTACCG TCGACATGGT GGTGCCATCC
TCGATACTGG GCGCAATCAC AGGTGAGCAG ATTGAGCCAT TTCTACGCCT TAGCCTAGAG
GATGCATCAC TCAAGCTACC AAGCAAAGAC CGTGCACCGC TCAACACGGC AACGGTTAAG
CATAATGCGC AGTTTCTTGG TCAGTTGTTT GGCTTAATGC CACAGATGCA AGCTGTACTT
GAGTTCTTGA TTGTCATCAA TGCCAATGCG GGGCTTCGAG AGTTAACCGA ATTACTGATT
GATGATGACT TTGATGTACT TGAACGAATG CTACAGGCTA AGACAACCCT CGATTTAGAG
GTCATCCTGT CGCAATTAGC GGTGTTTGAG CGCTATCAAC TGATTGCTGA AGCGACCTTG
GATGCGCCTT ACCGATTGCT GTTCCCAAAC GTACTGGTAT CCATTTTAGT GTCGCAGAAG
TTAACGAGCG CGGTCGACTT CTTAGCCCCC ATGCTCAGCA AAAGCCCCGA GGCACAATTT
AGTCTGTCGC AATTTGGGCA TGTGAACACT GACTTACTGG CTAACTACCT TGCGGCCATT
ACTAAAAAGC CCTCGGTAGG CGTCAATATC CTGCTCTATG GTAAAGCAGG TACAGGTAAA
ACTGAGTTGG CACGGACATT GGCAAAGACG ATTAAGCGCA ATCTACTGGA AGTCCAAAGC
CAGCAGTTAA TCGGGAGCCA ATACCGAAGT GACAGCATCA CAAAGGCGAC CAGCATACGC
CTTGTTCACC TGAGCTTGTT ACAAGGTTTA CTGGCTCACA GCAATGACAG CTTGTTATTG
GTCGATGAGT GTGAGGCGTT ATTCGTGCAA GCCGATGAGC AGTATTCCAA AGAACAATTG
ATGCAGGCGT TAGAGCAAAA CCCTGTCCCT GCCATTTGGA TTACCAACCA TGTTGGCTTG
TTAGAACCTA GCTTTATTCG CCGCTTTAAG TTGGTGATGG AAGTCCCTGT ACCCGATGAA
CCCTTTGCCT ATACCATCAA TGAGCACTTA CTAACACCGC TTAAGGTGTC ACAGGACTAT
CACCTGCTAC TGGCAGAAAA GCCTAATGTC ACCCCCGCAA TGGTTGGTAA TGCAGCTCAT
GTGGCAATGA CACTCAAGTT CAAAGGTGCC AAAGCGGAAG TCCTTATCGA TGAAGTGATT
GATGCCACCC TAGAAGCCTG TGGTGAAGAA GCACCACCGC CAAAGTATCA AGGGGAACTG
GCGTTCGATA GCAACATGGT CAACTTCAAA GTCAGTGATG ATGCTGCAAG TGTGACTACC
GCAGAAATGC TGGCCTCGAT TAACCATGCC GTTAAACAGG CCATGCCGAT TAGGGTGATG
CTGAGTGGTC CCCCTGGTAC GGGCAAGACG GCATGGGTAC ATCACTTAGC TGAAACCCAT
GGCTTTGAGC TGATGCACAT CAAATGCTCT GATGTACTCA GTAAGTATGT CGGTGACAGC
GAGCAGAACA TCGCTAGGCT CTTCAGAGAC GCGCACAGAC AGCAAAAGCT GATGCTCATC
GATGAAGTCG ACAGCTTGCT CAGCAAACGC GATAGCGCTC AAGCGCTGCA TGAAGTCCAG
CTCGTTAACG AACTGATATC TCAGCTTGAG TGCAACACTC TACCTGTGTT CGCAGCAACC
AATGCGCTTG CCAGTATTGA TAGTGCGGTG ATGCGCCGCT TTGACTTCAA GTTGGCATGT
GACTATTTAA CGAGTGACCA ACGCCAAGCA CTGTATCGAC AAGTCCTTGG GATTCAACGC
CTAAACCATG AAGAAGTATC AACCCTAAAC AGCCTAAACC AGTTAACACC CGGCGACTTT
GCCATCTTAG CAAGACGCCA ACGTTTTGAA CCCAAGCGCG ACCACCGCGC AACCGCCCTT
GCGCTCCTCA CCACCGAGAA CAGCCGCAAA CAAGGGCAAC CCCGTATCGG ATTTATCCGC
TAA
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| Protein sequence | MLKRAKSPRK WRANHCHYLA SQLSEALMLA AITVDMVVPS SILGAITGEQ IEPFLRLSLE
DASLKLPSKD RAPLNTATVK HNAQFLGQLF GLMPQMQAVL EFLIVINANA GLRELTELLI
DDDFDVLERM LQAKTTLDLE VILSQLAVFE RYQLIAEATL DAPYRLLFPN VLVSILVSQK
LTSAVDFLAP MLSKSPEAQF SLSQFGHVNT DLLANYLAAI TKKPSVGVNI LLYGKAGTGK
TELARTLAKT IKRNLLEVQS QQLIGSQYRS DSITKATSIR LVHLSLLQGL LAHSNDSLLL
VDECEALFVQ ADEQYSKEQL MQALEQNPVP AIWITNHVGL LEPSFIRRFK LVMEVPVPDE
PFAYTINEHL LTPLKVSQDY HLLLAEKPNV TPAMVGNAAH VAMTLKFKGA KAEVLIDEVI
DATLEACGEE APPPKYQGEL AFDSNMVNFK VSDDAASVTT AEMLASINHA VKQAMPIRVM
LSGPPGTGKT AWVHHLAETH GFELMHIKCS DVLSKYVGDS EQNIARLFRD AHRQQKLMLI
DEVDSLLSKR DSAQALHEVQ LVNELISQLE CNTLPVFAAT NALASIDSAV MRRFDFKLAC
DYLTSDQRQA LYRQVLGIQR LNHEEVSTLN SLNQLTPGDF AILARRQRFE PKRDHRATAL
ALLTTENSRK QGQPRIGFIR
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