Gene SO_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3873 
Symbol 
ID1171516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4019900 
End bp4020655 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content35% 
IMG OID637345637 
Producthypothetical protein 
Protein accessionNP_719405 
Protein GI24375362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT ATCAGTATTT ATTATTTACA ACACTATCAT TATTAATTAT AACAACTGTT 
AATGCAGAAA CAATTTCTAA AAATAACATT ATCGTAGGTT ATGAATTTTT ACTCGATGCA 
GAAGAAAACA ACCCAAACCT ATATGACCAA CCATATTTTA TATTAGGGCA CTCTACTTCG 
GCAGATTGGG GGAATATCGC GGGCTGGTTA AGGCTTGAAA ACCCAACAGA TAGTGCAAAT 
ACCCAACAGG GTACGGACGC AGGTTCAGCA ACAAAAGTCT GGCTTAAACT TGACTATAAT 
ATCGGTCAAT CCCCCTTTAA CACATGGGTA CAATCATTTA CTAGCTCAAA TAAAGCTGCA 
GTTGAGCAGG ATATATACTT AGGTGCTTCT TATGATATTA ACTATGCGAA AATAAAAGGG 
AGTTTCGGTC TAGGTATGCA ATATGCTTAT GGTAGTTTTG CACCTACAGG AAAGTCCTTT 
AACGGGATTT CTGGTGTTGG AATAACATTA ATACTAGGCT ACCCTATTAC ACCAGAATGG 
TTTACAAAAC TGTATTATGA AGCACAAATT GGACGTAGTA CAGAACATAA AGACGTTTTA 
AGCTATGAAT CATACGGTCA CCAATTTGTT TTAGGTATAG ATTATCTTTT ACAACCTCAA 
TTATTTGCAA GTTTCCTATA TAAGCATAGA CATAGCTGGG GGGGGGCAAT AAATGATGGT 
GGAGAACTAT TTATTGAGAT TGGATATACT TTTTAA
 
Protein sequence
MKIYQYLLFT TLSLLIITTV NAETISKNNI IVGYEFLLDA EENNPNLYDQ PYFILGHSTS 
ADWGNIAGWL RLENPTDSAN TQQGTDAGSA TKVWLKLDYN IGQSPFNTWV QSFTSSNKAA 
VEQDIYLGAS YDINYAKIKG SFGLGMQYAY GSFAPTGKSF NGISGVGITL ILGYPITPEW 
FTKLYYEAQI GRSTEHKDVL SYESYGHQFV LGIDYLLQPQ LFASFLYKHR HSWGGAINDG 
GELFIEIGYT F