Gene SO_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3866 
Symbol 
ID1171509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4013115 
End bp4014221 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content44% 
IMG OID637345630 
Productphage integrase family site specific recombinase 
Protein accessionNP_719398 
Protein GI24375355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG GGATATTGGT GGAACGTGGC CTTTTTGTTA ACTCCAAACG TTTTCGTGAT 
GTGGCAGATA AAGCCATTAA GGCTATGCAA AAGTCTATCG ACAATGGTAA AGATATCGAG 
AAGTACACGA CTTATATGCA GGTACTTCGC AAGTACCATA TCCCCTTTTT CGACCGAACT 
TATATCACCT CTATCGACAG TGACAAGCTG CGGGAATTTG ATAAATGGCG AATAGAGGAA 
TTCGGCCGTG AGCCAGCAAA GTCGACGCTA CTGAACCACA ATGCTGCCAT GCAGTTAGTG 
TTCAAAGAAG CTGTAGACCA GAAGTGGATG CTAGCCGCTC AAGTGCCATC CCTATCGACT 
AAAGGTGCTG AGTCACAGCG ACGTGCACAC TTCACACCAG AAGAGTATGA AAAAGCCTAT 
GATGCAGTGG TTGCTTTGGA AGGAAACAGC CGCAAAGAAA AGAGCAGACA AATCCGTGAA 
TTGCTCATCG ATTATATGGA ATTTGCAGTC TACACCGGCA TCAGAGCGGG TACTGAGATG 
GATAATCTAA CGTGGGGCGA TATAGGATTC CAGACCAATG GAATTGCCTT TCAGTTGTTT 
ATTACCGTCT CCAAAGGCAA AACCATCAAG CACACTGGCA CTCGTGAGAT TGTGTGTCGT 
GAAAAGATCC TGTCGAGCTT AGAATCATTA CGCGAACGAT TCCCAAACCG GAAACCCACA 
GACAAGATCT TTCGATTAGC CGATGGCAGT ACAACCAATG AGCTAACGAA AACCTTTGAA 
AAGGCGCTAA TCAGTGCAGG TTTAAAGACC TCTCCACATG GTGATAGGTC GCTTTACTCC 
TTACGCCACA GCTATATCAC TTGGCAACTC TTAGCGGGGG TTAATATGGA AGTATTGGCG 
AAACAGTGTG GTACTAGTGT TGCGATGATT GAAAAGCACT ACAGCCATGT AATCCCTAAG 
ATGTTCAGTA GGGAGTTGTC TGGTGTTGAC CTCGGTGAAG TAACAGTCAA GAAATCGATA 
AGAAAACGCA GTGATAAACT GCTTAACATA TTGAAAAATA GATATAAAGA GTGGGAAGCA 
CACTATAAAA AAGTGGGTTG TATTTAA
 
Protein sequence
MEQGILVERG LFVNSKRFRD VADKAIKAMQ KSIDNGKDIE KYTTYMQVLR KYHIPFFDRT 
YITSIDSDKL REFDKWRIEE FGREPAKSTL LNHNAAMQLV FKEAVDQKWM LAAQVPSLST 
KGAESQRRAH FTPEEYEKAY DAVVALEGNS RKEKSRQIRE LLIDYMEFAV YTGIRAGTEM 
DNLTWGDIGF QTNGIAFQLF ITVSKGKTIK HTGTREIVCR EKILSSLESL RERFPNRKPT 
DKIFRLADGS TTNELTKTFE KALISAGLKT SPHGDRSLYS LRHSYITWQL LAGVNMEVLA 
KQCGTSVAMI EKHYSHVIPK MFSRELSGVD LGEVTVKKSI RKRSDKLLNI LKNRYKEWEA 
HYKKVGCI