Gene SO_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3861 
Symbol 
ID1171504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4007847 
End bp4009028 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID637345625 
Productiron-sulfur cluster-binding protein 
Protein accessionNP_719393 
Protein GI24375350 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGA CAGTAACCAC TTCCAGCAAT GTTTCCGATG CTGCCATGCT TTCCCGTCTC 
GCCTTGCAAA TAAAAAGCTG GGGTAAGGCG CTTGGTTTTG CCCAGATAGG CATTTGTGAC
ACCGACTTAA CCGCCGAAGA AGCAAAACTA CAAACGTGGT TAGATAAAGG ATTCCACGGG
GAAATGGCCT ACATGGAAAC ACACGGTATG ATGCGTGCCC GCCCCCATGA GTTACACTCA
GGTACAGTAC GAGTGATATC AGCCCGAATG GATTATTTGC CACCAGAGGC AGGCTTTGCC
ACTAACTTAG CCTCGCCGAA TATGGGCTAT ATCTCCCGCT ACGCAGGCGG TAGGGATTAT
CACAAACTCA TCCGCGCTCG CTTAAAAAAG CTTGGCGATC AAATCAATAG CGAACTTGTC
GCCTTAGGTT TCGATGCCGC GGACTTTAGG CCATTTGTCG ATTCTGCCCC AGTGCTAGAA
CGTCCATTAG CCGAAAAAGC CGGGATAGGC TGGACGGGTA AGCACTCACT TATCCTTAAT
CACGATGCAG GTAGTTGGTT CTTTTTAGGG GAATTACTGA TCAACCTCCC CTTGCCTGTA
GATATCCCCG TTCAGGAAGG TTGCCATTCC TGTGTAGCCT GTATCACTTC CTGCCCAACG
GGCGCCATTG TTGAACCTTA TACTGTCGAT GCAAGACGTT GTATTTCATA TCTTACCATC
GAATTACAGG GGGCCATTCC AGAAGAATTT CGTCCGTTAA TGGGTAATCG CATTTATGGC
TGCGATGATT GTCAGTTGGT GTGCCCAGTC AATCGTGCGG CGCCGCTTAC ACAAGAGAGT
GATTTCCATA TTCGCCCCAA ACTCAAACAG CCCGAGCTAC TCACGCTATT TACTTGGAGT
GAAACAGAAT TTTTAAAGCA AACCGAAGGC AGTGCCATTC GCCGTATTGG CCATCAGCGT
TGGTTACGCA ATATTGCCGT CGCCCTAGGC AATGCGCCTA GCTCGGCCGA CATAATCTCC
GCCTTAGAGC AACGTAAAGC CCAAGCGGAT GTTGATGAAA TGGTTAAAGA ACATATCGAT
TGGGCATTAG CGCAGCAACG CGCTGGCGAC TTGCAAACCA ATAACCGCAA AACCGAACGA
TTGGTTAGAG TCATTCAAAA AGGCTTACCA AGGGATGCCT AG
 
Protein sequence
MSMTVTTSSN VSDAAMLSRL ALQIKSWGKA LGFAQIGICD TDLTAEEAKL QTWLDKGFHG 
EMAYMETHGM MRARPHELHS GTVRVISARM DYLPPEAGFA TNLASPNMGY ISRYAGGRDY
HKLIRARLKK LGDQINSELV ALGFDAADFR PFVDSAPVLE RPLAEKAGIG WTGKHSLILN
HDAGSWFFLG ELLINLPLPV DIPVQEGCHS CVACITSCPT GAIVEPYTVD ARRCISYLTI
ELQGAIPEEF RPLMGNRIYG CDDCQLVCPV NRAAPLTQES DFHIRPKLKQ PELLTLFTWS
ETEFLKQTEG SAIRRIGHQR WLRNIAVALG NAPSSADIIS ALEQRKAQAD VDEMVKEHID
WALAQQRAGD LQTNNRKTER LVRVIQKGLP RDA