| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3860 |
|---|
| Symbol | |
|---|
| ID | 1171503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4006888 |
|---|
| End bp | 4007685 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637345624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_719392 |
|---|
| Protein GI | 24375349 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTCG CCACTTACAA ACACTGCTAT CGCCTGTTGT TGTGTATGAG CTTAGGTTAT
TCAGGGCTGG TTTTCGCGGT AACTGCGCCA GTACGTTTAG TCACTGAAGC TTGGCCCCCC
ATGAGTTTTG AGCAAGATGG CGTGCCCACA GGCTTTGGGG TTGAATTGGT TAATATGCTG
CAAGTTAGCC TTGGGCAGCA GCAGAGTATC GAAGTATTAC CTTGGGCTCG GGCTTATTCT
ATCGCCAGCA CAACGCCAAA TGTGCTGTTG TTTGCAACAT CGATCAGCGA TGAGCGGGAA
ACCCATTTTG ACTTTATTGG CCCTATTGCG ACCAGTAAAA TCACTCTCTA CGCCAAAGCC
GACGATAGTA TTAATATCAA TCAGTTATCT GATGTTAATG CGGCGGGAAT CGTTGGTGTT
TATCGTGAAT CCGTGGGGGC GCAACTGTTA CAACAACAGG GCGTTAATGC ATTATTAGTG
GCGAGTTTTC CTCAGCAATC GGCGAAACAG TTATTATTTT CTCGGGTGCG ACTTTGGTGT
CAGGCTGATT TAGCCGTTAA GCACATTCTC GAAGAAGTGG GGGCGAAGGA GTCGGCTATC
AAACCCGTTT ATACTCTCGC TGAAATCCGT CTGTATCTCG CTTTCTCTAA GGGGACGCCT
GCAGAAACGG TTCAGCGCTG GCAAACTGAG TTAGAAAAGC GAAAAGAGTC AGGCGAGTTT
GCAAGGCTTT ATCAAAAATG GTTTGGTACT TTACCCCCGC CCCTTGAAAA TCAGATTTTT
TGGCATAAGA CTGATTAA
|
|---|
| Protein sequence | MLFATYKHCY RLLLCMSLGY SGLVFAVTAP VRLVTEAWPP MSFEQDGVPT GFGVELVNML
QVSLGQQQSI EVLPWARAYS IASTTPNVLL FATSISDERE THFDFIGPIA TSKITLYAKA
DDSININQLS DVNAAGIVGV YRESVGAQLL QQQGVNALLV ASFPQQSAKQ LLFSRVRLWC
QADLAVKHIL EEVGAKESAI KPVYTLAEIR LYLAFSKGTP AETVQRWQTE LEKRKESGEF
ARLYQKWFGT LPPPLENQIF WHKTD
|
|---|
| |