Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3857 |
Symbol | |
ID | 1171500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4003008 |
End bp | 4003535 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345621 |
Product | PAP2 family protein |
Protein accession | NP_719389 |
Protein GI | 24375346 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAGA TACTCTGTGC CGTCCTGTTA CTGTTTACTG GCGCCAGTTG GGCGAACTCC GATGATCTTG AAACGTCAGG AGATGTTGTG CATCTGCTCT TACCTGCAAC CGCCTTGGGG GCAACTTTAT TTTATGAAGA GGGTCATGAG GGAAGTTGGC AATTACTCAA GGCCGCAGTA TCGAGTCGAG TGATCGTCGA AGGCTTAAAG CTGGGTGTCA ATAAGGACAG ACCTGATGGC AGTGGTGATG ATTCTTTCCC ATCAGGACAC ACCTCTGATA GCTTTATGGC GGCGACGTTT ATCCAACAAC GTTATGGTTG GCAATATGGC CTACCAGCTT ATCTTGCCGC TTCATATGTG GGATATACTC GAGTGGAGAG CGATAAGCAT TATGTAGAAG ATGTGCTCGC AGGGGCTGCT ATTGGTATGC TGGCGGGTTG GTATTTTACG GAGCCCTATA AAGGGATCAC AGTGACACCG TTAGCCCATA ATGGGGTTTA TGGTTTATAT ATTAGCGGCC AATTTTAA
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Protein sequence | MKKILCAVLL LFTGASWANS DDLETSGDVV HLLLPATALG ATLFYEEGHE GSWQLLKAAV SSRVIVEGLK LGVNKDRPDG SGDDSFPSGH TSDSFMAATF IQQRYGWQYG LPAYLAASYV GYTRVESDKH YVEDVLAGAA IGMLAGWYFT EPYKGITVTP LAHNGVYGLY ISGQF
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