Gene SO_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3857 
Symbol 
ID1171500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4003008 
End bp4003535 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content47% 
IMG OID637345621 
ProductPAP2 family protein 
Protein accessionNP_719389 
Protein GI24375346 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAGA TACTCTGTGC CGTCCTGTTA CTGTTTACTG GCGCCAGTTG GGCGAACTCC 
GATGATCTTG AAACGTCAGG AGATGTTGTG CATCTGCTCT TACCTGCAAC CGCCTTGGGG
GCAACTTTAT TTTATGAAGA GGGTCATGAG GGAAGTTGGC AATTACTCAA GGCCGCAGTA
TCGAGTCGAG TGATCGTCGA AGGCTTAAAG CTGGGTGTCA ATAAGGACAG ACCTGATGGC
AGTGGTGATG ATTCTTTCCC ATCAGGACAC ACCTCTGATA GCTTTATGGC GGCGACGTTT
ATCCAACAAC GTTATGGTTG GCAATATGGC CTACCAGCTT ATCTTGCCGC TTCATATGTG
GGATATACTC GAGTGGAGAG CGATAAGCAT TATGTAGAAG ATGTGCTCGC AGGGGCTGCT
ATTGGTATGC TGGCGGGTTG GTATTTTACG GAGCCCTATA AAGGGATCAC AGTGACACCG
TTAGCCCATA ATGGGGTTTA TGGTTTATAT ATTAGCGGCC AATTTTAA
 
Protein sequence
MKKILCAVLL LFTGASWANS DDLETSGDVV HLLLPATALG ATLFYEEGHE GSWQLLKAAV 
SSRVIVEGLK LGVNKDRPDG SGDDSFPSGH TSDSFMAATF IQQRYGWQYG LPAYLAASYV
GYTRVESDKH YVEDVLAGAA IGMLAGWYFT EPYKGITVTP LAHNGVYGLY ISGQF