Gene SO_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3834 
SymbolhemA 
ID1171479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3983506 
End bp3984756 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content48% 
IMG OID637345601 
Productglutamyl-tRNA reductase 
Protein accessionNP_719367 
Protein GI24375324 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTG TAGCAATCGG TATTAACCAT AAAACAGCCA CGGTAGACCT GCGTGAGAAA 
GTCGCCTTCT CTCCGGACAA AATTCATGAT GCCATGAAGA GTCTGGCCAG TCGTACACGC
TCGGGTGAAG CCGTTATCGT CTCGACCTGC AATCGCACTG AATTGTATTG TAACAATGGC
GATGAGACCG ATATCATTGA ATGGCTTGAA GAATATCATG GCCTAGAACA TCAAGATGTC
GCGCCTTGCC TCTACAATTA TCACGGGCAA GAGGCGGTAA GGCATTTGAT GCGCGTCGCT
TCAGGTCTTG ACTCGTTGAT CCTTGGTGAG CCGCAGATTC TTGGTCAAGT TAAACAAGCC
TTTGTCAAAG CCAAAGAAGC CGGCACAGTT GCCTTAACCA TTGACCGCTT GTTCCAAAAT
ACCTTCTCAG TTGCTAAAAA AGTGCGTACC GAAACCGAAA TCGGTGCCGC TGCTGTATCG
GTCGCCTTTG CGGCTGTCAG CATGGCAAAA CATATCTTCT CTTCACTGTC GACAACCAAG
GTGCTGTTAA TTGGTGCTGG TGAAACGATT GAGCTAGTGG CAAAGCATCT AAAAGATAAC
GGCGTCGCCT CAATGGTGGT GGCAAACCGT ACTTTAGAGC GTGCCCAAAG CATGTGTGAG
GAATTTAATG CCACGGCAAT TACACTGGCA CAGATACCAG ATTTTCTCCC TAAAGCCGAT
ATCGTGATAT CCTCTACCGC CAGCCCGCTG CCAATCCTTG GTAAAGGCAT GGTAGAAAAA
GCGCTAAAGC AGCGTCGCCA TCAACCTATG TTATTGGTTG ATATAGCAGT TCCTCGGGAT
ATTGAGCCAG AAGTCGCCGA TTTGGACGAT GCGTTTCTGT ATACAGTGGA CGACCTGCAT
AGCATTATTG AACAGAATAA GGCTTCCCGT AAGGAGGCCG CCGAGCAAGC TGAATTAATT
ACTGAAGAAC AATCTCATCT ATTTATGGAG TGGGTGCGTT CTTTAGAGTC GGTCGATAGT
ATTCGCGAGT ATCGCAGCCA GAGCATGGCG ATAAAGGATG AGTTGGTGGA ACGCGCCCTG
AATAAATTAG CGCAGGGGGG CGACACTGAG CAGGTATTGG TTGAATTAGC CAATCGTCTG
ACCAATAGAC TCATTCACGC ACCTACCCAA GCCCTCACGG TGGCCAGCCG TCAGGGGGAT
TTGAATACAT TAGGTCAGTT AAGAACAGCG CTCGGATTAG ATAAAAACTA A
 
Protein sequence
MSLVAIGINH KTATVDLREK VAFSPDKIHD AMKSLASRTR SGEAVIVSTC NRTELYCNNG 
DETDIIEWLE EYHGLEHQDV APCLYNYHGQ EAVRHLMRVA SGLDSLILGE PQILGQVKQA
FVKAKEAGTV ALTIDRLFQN TFSVAKKVRT ETEIGAAAVS VAFAAVSMAK HIFSSLSTTK
VLLIGAGETI ELVAKHLKDN GVASMVVANR TLERAQSMCE EFNATAITLA QIPDFLPKAD
IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEPEVADLDD AFLYTVDDLH
SIIEQNKASR KEAAEQAELI TEEQSHLFME WVRSLESVDS IREYRSQSMA IKDELVERAL
NKLAQGGDTE QVLVELANRL TNRLIHAPTQ ALTVASRQGD LNTLGQLRTA LGLDKN