Gene SO_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3829 
Symbol 
ID1171474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3979675 
End bp3980463 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID637345596 
Producthypothetical protein 
Protein accessionNP_719362 
Protein GI24375319 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAT ACACTCTGCA AGATGGCATT TCATTGCCCG AGTCGGCATT GGATGTAGGT 
GCTCACCTTG GCTTTTCAAA CCTCGAAGCG GCGAAATGGG CTTGGTTTGA ATTAGCGGGA 
GCCGTATTAA GTCATTATCT GGTGGATCAA CAACAACGCT TAACAGCATT GTTTCGTTGG 
TTTTATCTGG ATTTGGGGTT CTGTGTTCGC GAAAATTACT TCAGTACTGA AGCGGCGGAC 
TTAGGTACTT GTCTTATCAC TAAACAGGGC AATAGCACCA CGCTGGCGAC GGTTTTGATG 
TTATTGGCTA AGCAGCTTGA TTTAGAGCTA GAAGCGCTGT TATTACCAGG TAATACCGTA 
CTTCGCAGTA AAATTGCTGG GGTTGTGCGT TATCACGATC CATTGACAGG AAAGGAACTG 
ACTAAGCATC AGCTCCATGT CTTAGTACGT GGTGAACTCG GTAACGCGGC GGAACTTAAG 
CCGAGTTACT TAAAAGCGGC ATCGGTAAAG AAGTTGATTT CACGCATGCT GCACGAGATT 
AAGGCGGGTT GCATTGTTTC CCATCAATTT GAGGCGGCGA TGGAATGTTG TAACTTGTTA 
CTTCAGTGGC ATCCCGATGA TGTGCACTTA AATCGTGAAC GCGCCTTTAT CGCTCAGCAG 
CTTGGATGCA TTAATGTTGC AGCGGCCGAT CTGCAACATT TTGTCGATAA CAGTCCACAC 
GATCCTGTTA TCGAAATCGT TAAGATGCAG CTTAAAGAAC TGAGTGAGCA CGCTGAAATC 
TATCATTAA
 
Protein sequence
MGKYTLQDGI SLPESALDVG AHLGFSNLEA AKWAWFELAG AVLSHYLVDQ QQRLTALFRW 
FYLDLGFCVR ENYFSTEAAD LGTCLITKQG NSTTLATVLM LLAKQLDLEL EALLLPGNTV 
LRSKIAGVVR YHDPLTGKEL TKHQLHVLVR GELGNAAELK PSYLKAASVK KLISRMLHEI 
KAGCIVSHQF EAAMECCNLL LQWHPDDVHL NRERAFIAQQ LGCINVAAAD LQHFVDNSPH 
DPVIEIVKMQ LKELSEHAEI YH