Gene SO_3812 details

Gene Information

• Locus tag: SO_3812
• Symbol: ppiA
• ID: 1171454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3964412
• End bp: 3964999
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637345579
• Product: peptidyl-prolyl cis-trans isomerase A
• Protein accession: NP_719348
• Protein GI: 24375305
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCGTT GGATATCTGC ACTCTTAGTT CTCTGTGCTA GTTATAGCAG CTGGGCGGCA 
ATCGACATTC AACCCGATAG CTTGTATCCC CAAGTCGAGT TTGATACGAG TTTAGGTAAG 
ATTGTTGTCG AACTCGATAG AACCCGCGCC CCCATTACAG TCGATAACTT CCTCACCTAT 
GTGGTCAAAG GTGAGTACAA CAACACGATT TTCCATCGCG TGATCAGTGA CTTTGTAGTG 
CAAGGCGGTG GACTGAATCC GCAATTAGAA GAGTTGCCAG CGGGCAAGCC CATAGTCAAC 
GAGTCGGGCA ATGGTTTATC CAATAGCATG GGCACCATTG CCATGGCGCG CGACAATGAA 
CCCCATTCGG CCACCCGCCA GTTTTACTTT AACGTTGCAG ACAACACTAA GCTTGACCCC 
TCAAAACGTC GTTGGGGTTA TGCGGTATTT GGTGAAGTGA TTGAAGGTAA GCAAGTACTC 
GAAGCCATGG CCGTAGTAGA GACAACCACT AATGCCAAAC TGAATTGGCC CGATGTACCT 
GTCACTCCTA TCATATTGAA AACAGCTAAA TTACTCCCGA AAAAATAA 

 

Protein sequence

MFRWISALLV LCASYSSWAA IDIQPDSLYP QVEFDTSLGK IVVELDRTRA PITVDNFLTY 
VVKGEYNNTI FHRVISDFVV QGGGLNPQLE ELPAGKPIVN ESGNGLSNSM GTIAMARDNE 
PHSATRQFYF NVADNTKLDP SKRRWGYAVF GEVIEGKQVL EAMAVVETTT NAKLNWPDVP 
VTPIILKTAK LLPKK