| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3804 |
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| Symbol | ubiX |
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| ID | 1171448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3958550 |
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| End bp | 3959209 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637345573 |
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| Product | aromatic acid decarboxylase |
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| Protein accession | NP_719340 |
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| Protein GI | 24375297 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTATG CCAAATCATC GAAGGCGATT AGCCTCGCGT GGACAGGCGC TTCGGGCGCG
CCCTATGGTT TGAAGTTATT AGAATGCTTA TTGGCTTCGG GCTACCAAGT GTTTTTAATG
ATCTCCAGTG CCGCTCGGGT GGTACTGGCC ACTGAACATG GCCTACAGCT TAGTGCTAAT
AGCGATAAAG CCAAGGCACA ATTACTCGAT GTACTGGCAC AGAAGAATAT CCCCTTATCT
GGTGAGCTAG TGGTATTAGG CAAGGATGAG TGGTTTTCAC CGCCAGCCTC TGGCAGTGCT
GCACCTAAAC AAATGGTGAT TTGCCCTTGC TCGACGGGGA CGCTTGCTGC GGTCGCGACG
GGAATGAGCA ATAATTTGCT CGAGCGCGCG GCAGATGTGG TGCTAAAAGA GCGCGGTCAG
CTTATCTTGG TTCCGCGGGA AACGCCATTT AACGCCATAC ACTTAGAGCA TATGCTCAAC
CTATCGCGCC TAGGCGCCAC TATTATGCCG GCGGCGCCAG GCTTTTATCA CAATCCCAAA
TCGGTTGAAG ATCTGATAGA CTTCATGGTC GCTCGAATCC TCGATCATTT GGGCGTTGAC
CATGCATTAA CGAGTCGTTG GGGTTATGAC AAACACTCCC CCAATGACAT CGACAATTGA
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| Protein sequence | MAYAKSSKAI SLAWTGASGA PYGLKLLECL LASGYQVFLM ISSAARVVLA TEHGLQLSAN
SDKAKAQLLD VLAQKNIPLS GELVVLGKDE WFSPPASGSA APKQMVICPC STGTLAAVAT
GMSNNLLERA ADVVLKERGQ LILVPRETPF NAIHLEHMLN LSRLGATIMP AAPGFYHNPK
SVEDLIDFMV ARILDHLGVD HALTSRWGYD KHSPNDIDN
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