Gene SO_3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3802 
Symbol 
ID1171446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3956830 
End bp3957768 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content47% 
IMG OID637345571 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_719338 
Protein GI24375295 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATC ATGCCCATGC TTTAGTACTC GAGGGGCTTA AAAAAACCTA TAAAGGCGGT 
GTCGAAGCGG TAAAGGGTAT TAGCCTTACC GTTGAGCAGG GAGACTTTTT CGCCCTATTA 
GGTCCTAACG GCGCAGGTAA ATCGACCACT ATCGGTATTA TCAGCTCCTT GGTGCAGAAA 
ACCGCTGGCT CAGTCAAAGT GTTTGATTTT GATATTGATA AGCAGCTCGA AGAAGCCAAG 
CTGTGTATTG GCTTAGTGCC GCAGGAGTTT AACTTCAACC AGTTTGAAAC TGTGCTGCAA 
ATTGTGGTGA ATCAGGCGGG CTATTATGGC GTCCCCAAAG CTGTAGCCCT TGAGCGTGCG 
CAAAAATACT TAACTCAGTT GGATTTGTGG GAGAAACGTA ATAGTCAGTC TCGCACCTTG 
TCGGGTGGGA TGAAGCGGCG GTTAATGATC GCTCGTGCCC TAATGCATGA ACCTAAATTA 
TTGATTTTAG ATGAGCCAAC TGCGGGGGTC GATATTGAGC TGCGCCGCTC AATGTGGGAA 
TTTCTCAAGC AGATCAATCA GCAGGGTGTG ACGATCATCC TGACCACCCA TTACCTTGAA 
GAAGCTGAAA TGCTGTGCCG CAATATCGGC ATTATTGATA AAGGTGTGCT GGTGGAATGC 
ACGAGCATGA AAGCATTGCT GAGTAAACTG AATCTTGAAA CCTTTATTCT TGACCTGCGC 
CGCGATATTT ATGTCGCGCC AACACTCGAT GGCATGGTGT GCCGTTTAAC TGACCCGCAT 
ACCTTAGAAG TCGATGTGGC GAAGGAGCAT AATCTCAACG ATGTGTTTAC CCAATTAACC 
GCGGCGAATG TGGAAGTGTT GTCGATGCGA AATAAGTCGA ATCGGTTAGA AGAATTGTTT 
GTCGAGTTAG TGAAGAAAAC CCAAGGAGCT AAGGCATGA
 
Protein sequence
MANHAHALVL EGLKKTYKGG VEAVKGISLT VEQGDFFALL GPNGAGKSTT IGIISSLVQK 
TAGSVKVFDF DIDKQLEEAK LCIGLVPQEF NFNQFETVLQ IVVNQAGYYG VPKAVALERA 
QKYLTQLDLW EKRNSQSRTL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWE 
FLKQINQQGV TIILTTHYLE EAEMLCRNIG IIDKGVLVEC TSMKALLSKL NLETFILDLR 
RDIYVAPTLD GMVCRLTDPH TLEVDVAKEH NLNDVFTQLT AANVEVLSMR NKSNRLEELF 
VELVKKTQGA KA