Gene SO_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3800 
Symbol 
ID1171444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3952311 
End bp3955958 
Gene Length3648 bp 
Protein Length1215 aa 
Translation table11 
GC content45% 
IMG OID637345569 
Productserine protease 
Protein accessionNP_719336 
Protein GI24375293 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACAA AACTATCTCT CGCTATCTCC GCAGCACTGT TAACGAGTGC TGCTGTTGCA 
GGTACAACAG CTCAGTACAA TACAACCAAT CAAACAACTG ACAAGTATGC AGGCTTAAGC
GTTACTAAAA ATGATAGTAA CGAGCAAAAA CAGGCTGTAG CTTGGATGGT AAAACTAAAA
GCACCTTCTC TTGCGCAGCA AAGCCAGCTA AAAGGATTTA ATAAACAATC AGTAATGAGC
CAAATAGAAA GCTCTCAAAC CAAGGTAAAA AACGCCATTA CCAGCATGGA TGCTGATTTA
AAAATCGTTG CCACTACTTC AAAATTAGTC AACTCAATCA TTGTTGAAGG CAATCATAAA
CAACTGGTTT CATTACTGAA CAATGCTGAA GTAGCGGATA TTCTGCCTAT CTATGACTAC
AAGCTTGATG TAGCAGCCAG TGCTGAATAT ATCAAAGCAA AAGCGGTTAT TGATGCGGGT
ATTGCCTCAG GTAAAGGCCA ACGAGTTGCC GTACTCGACA CAGGCGTTGA CTATACCCAC
AAAGCCTTAG GTGGCTCAGG ATTAGTCGCT GACTATAAAG CTGCCGTCGC CGCAAAAAGC
GAAATGCCAA ACTGGCCCCA AGGTAAAGTC ATTGGTGGCT GGGACTTTGT CAATAATGAT
CCTAACCCAA TTGACGTTAC CACAAACCAC GGCACCCATG TGAGCCACTC AGTAGTTGGG
ACGGCGCCTG ATGTAGAACT ACTTGTATAT TCAGTATGTA ACTCAGGCTG TTCTGGTATC
GCTCAATTAA ACGCACTTGA AGCCTCTATG GATCCAAACG GTGATGGAGA CATCAGCGAT
CGCGTCGACA CTGTTAACAT GTCATTAGGT GGCGACTTTG GTGATGTTGA AGATGGCGCC
GTGCAAGTGA TGATCAACGA AATGGTGCAA CTGGGCGTCA ACCTTGTCAT CTCCGCAGGT
AACGATGGTC CAACACCTTT TGTGGTCGGT GGCCCAAGTA CGACTAATAG TGCCCTTTCC
GTTGGCGCAA TGACGCACCC AACCACAAAA GTTGGCAAAA TTGAAGCGTC TATTGCGGGT
AATACAGTCA CAGCAGTTGG CGCTGGATTT AATAAATCCA ATGCATATAG CTTCACTAAT
ACCGTTGCGC CGATTGTTTA CCCCGCAGCC AATAAAAATG GCTGCACTGC CTACACAGAA
GATTTAACGG GTAAAACCGT TTTAATCGAT CGTGGAACTT GTGGATTCGT AGTTAAAGTT
CTGAATGCTC AGTTAAAAGG AGCTTCATTT GTTATCGTAG CCAACAACGC AGCCAATGCT
GGCGCGTTTG TGATGGGCGG AACCGACGAC AAGATCACCA TTCCTTCGGT AATGGTTTCT
AAGGAAGATG GCGATGCAAT CAAAACCGCA CTCGCCTCGG GTGATGTCGC ATTTAGTATT
GCATCGACTG AATTAGGTAC TGCTGGAGCC ATTGCGACCT TTACCTCAAG AGGCCCATCG
ATTGGCGGAA CCTTAAAACC AGAGATTACC GCTCCTGGTA CTGATATCCT CACCGCACAC
CCAGGATTAG GTGAAGGCTT AACTCCGATC AGCGGAACAT CCTTCTCAAG CCCAATTACG
GCTGGTGCGG TAAGTATCAT TCGTGAAGCA TTACCTCATC GCAATGCATT TGAGGTAAAA
GCGACCATCA TGAACGCTGC AAACCTTGAT GTGACGCTTG AGCCAAAAGA GATTAACCCA
GATACAGAGC TAGCACCGAT TAGCTATATC GGTTCTGGTT TAGTCGACGT AGAAAAAGCC
ATTAATCTGC CAGTTGCCGC TTGGAATAAA GACACCAAAC AAGCTGCGTT AGCCTTTGGC
TTATTAGCGC TCAACAAAAC CACATCAATC ACCAAAACTG TCACCGTTAA AAACTTCTCT
GCAACTGAAA AAACTTACAC CTTAAAAGTC GATCAACGTT TCCAAAACGA TCTTGATTCA
GGCGCCTTAA GTTTTGCATT ACCCGCCAGT GTCACTATTC CTGCAGGACA AACGATCAAT
TTTGATGTAA CGGCAACGAT TGACCCGACA AAATTACCAG AGTGGTCGCT AACATCATCC
TATGAACTCG ATGGAACGGC AGCGGATGCA TCTGCGGCGC TGACACTTTC TGAATATGAT
GGTGCCATCC AATTTATGGA GGGTGACGTA AAAGCGCTCC ATTTGGTGTA TCACGTACTA
CCTAAAGCGG CTGCGGCAAT TTCAGTCGAA ACTGAAGTCA CCGAAGACGG CTTGGTACGA
ACGCTCACTA ACGTTGGCGC GACGTCAATT ACCGATCCAT TTACAGCCCC ATTAATCGCG
ACAAGCCCTG TAGATCAATC TAAACGTCAC GACCTGTTAA ATGCTTCTAG TGAGCTATTA
CTTAGCAGCT CATGTGATAC TGGCATTGCA ATCTATAACA CCTTGCAAAT GCGTGACCCT
ATCATTCATG CATTAGTGGC AAGTTATGAT GTAGATTATG ACCTCAACAA TGACGGTGTC
TGGGACTACA CAGCAGCAAC AGTAAACTTA GACTGGTTTA GCACACGTGA CAATCCTTTA
CCAAGATCTA TCTATGGTTT AGTGGCTAAA TACGGCACTT CATCAGGCAC CTTAGAGCCG
GTGTTCCACG TCACAGGTAA TAACTTCCTT ACCAGTAAAG TGTGTTTAGA AGATATTGGT
TTGGCTGAAG CTGACTTAGG TAAAACCATT AAAGTTCGTT ACCGTGTTGA AGATAGTGAT
TGGGCACCGA TCCCCTCAGG TGATGAAGAC AGTGTTGTAG CTTCACTCGT ACTTGATGGA
TCAGGAACGT CTGCAATGTT GCTGGATGCG AAAGGTAATG AAGTCACTGA ACTCAAACCT
GGTGAAAGCG CCATTTTAGA AACTAAAGTT GGTAGTAATG CCAAAGGCTT TATGTTCTTG
TCTGACTCAG GCTCTATGTC TGTCGTAGCA AACACAACAG ATGAAGGCAA CTCTGCACCA
ACGGTAGAAA ATTTAACACT GTCAGTGAAT AAAGGAACGG CTGCAGGAAG CGTACTAGGT
CAACTCAAGG CGACAGACCC AGATATGTTA ACGAGCCCAT TCTCTGAGTT TGTGACACTC
AGCTCTAACA GCAGTATGGT CGTTATCGCT AAAGATGGAA CTGTCCGCTT AAGTGATAAT
GCGGTAATCA ATCAACAAAG CAAAACAATA GAAGTTGAAG TGATTGCACT CGACACCATG
GGCAACGCAT CGACTCCTGC GAAAGTCACT GTGTTGATTA ATAATACTAA GCCATCTGTT
ACACCAACTA ATGCAAATGC TACCGAAAAT TCATATGTCG CATTACTTGC AAATGGTAAA
GATGTTGATG GTGATGAACT CACTTACACA TGGACTCAAA CATCCGGTCC TTCAGTAAGT
TTCGTCAACG GCAAAGATAG AATCGGGTTT ACCGCACCCG CTGGTGAAAA CGTTTACACC
TTTACCGTTG TCGCCTCTGA TGGGGTTGAT AATAGTAATG TTGGCACATC TACTGTCACG
GTAAAAACAG CGAAGTCTAA CAACGGTGGC GGCACATCTG GTGGTGCTCT TGGCTGGTTA
ACTGCATTGT TATTACCTCT GGCAGCATTA CGTCGTCGTA TGAAGTAA
 
Protein sequence
MKTKLSLAIS AALLTSAAVA GTTAQYNTTN QTTDKYAGLS VTKNDSNEQK QAVAWMVKLK 
APSLAQQSQL KGFNKQSVMS QIESSQTKVK NAITSMDADL KIVATTSKLV NSIIVEGNHK
QLVSLLNNAE VADILPIYDY KLDVAASAEY IKAKAVIDAG IASGKGQRVA VLDTGVDYTH
KALGGSGLVA DYKAAVAAKS EMPNWPQGKV IGGWDFVNND PNPIDVTTNH GTHVSHSVVG
TAPDVELLVY SVCNSGCSGI AQLNALEASM DPNGDGDISD RVDTVNMSLG GDFGDVEDGA
VQVMINEMVQ LGVNLVISAG NDGPTPFVVG GPSTTNSALS VGAMTHPTTK VGKIEASIAG
NTVTAVGAGF NKSNAYSFTN TVAPIVYPAA NKNGCTAYTE DLTGKTVLID RGTCGFVVKV
LNAQLKGASF VIVANNAANA GAFVMGGTDD KITIPSVMVS KEDGDAIKTA LASGDVAFSI
ASTELGTAGA IATFTSRGPS IGGTLKPEIT APGTDILTAH PGLGEGLTPI SGTSFSSPIT
AGAVSIIREA LPHRNAFEVK ATIMNAANLD VTLEPKEINP DTELAPISYI GSGLVDVEKA
INLPVAAWNK DTKQAALAFG LLALNKTTSI TKTVTVKNFS ATEKTYTLKV DQRFQNDLDS
GALSFALPAS VTIPAGQTIN FDVTATIDPT KLPEWSLTSS YELDGTAADA SAALTLSEYD
GAIQFMEGDV KALHLVYHVL PKAAAAISVE TEVTEDGLVR TLTNVGATSI TDPFTAPLIA
TSPVDQSKRH DLLNASSELL LSSSCDTGIA IYNTLQMRDP IIHALVASYD VDYDLNNDGV
WDYTAATVNL DWFSTRDNPL PRSIYGLVAK YGTSSGTLEP VFHVTGNNFL TSKVCLEDIG
LAEADLGKTI KVRYRVEDSD WAPIPSGDED SVVASLVLDG SGTSAMLLDA KGNEVTELKP
GESAILETKV GSNAKGFMFL SDSGSMSVVA NTTDEGNSAP TVENLTLSVN KGTAAGSVLG
QLKATDPDML TSPFSEFVTL SSNSSMVVIA KDGTVRLSDN AVINQQSKTI EVEVIALDTM
GNASTPAKVT VLINNTKPSV TPTNANATEN SYVALLANGK DVDGDELTYT WTQTSGPSVS
FVNGKDRIGF TAPAGENVYT FTVVASDGVD NSNVGTSTVT VKTAKSNNGG GTSGGALGWL
TALLLPLAAL RRRMK