| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3794 |
|---|
| Symbol | |
|---|
| ID | 1171438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3945185 |
|---|
| End bp | 3947464 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637345564 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_719331 |
|---|
| Protein GI | 24375288 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGT TGAACGTATT TAAAGCGAAG TTGTTTAATG CCAAAGAAAA TCGCGGCGTC
CAGCAAGACA TTCCACCCCA AACACCTCGG CCGCAAGCTT CTCTCGCCGC CTCTCCGTTC
AAACCTTATT TTAGCCTTGG CATCCAAGCG ACTCCGGCGC AAGCCAATCG AGTGGATAAT
CAGGGAGCGA TAAATCGATA TTATTTTGAT AACCCGCAAA CCATTGAACT CCTTGGCTGG
GAACTTAAGC ATGAGTCCTG CATTTTTCAC GAGACTCTAT TTGACAGCAT TGAGGTCAAT
GGCCCTGAGC AATATTTTTA TCTAGGCAAA GATAAAACCT GTAGCCTACT CCGCCAGCAC
GATGCTGCAG AGCAACCACG CTGGCAAGTG GAACTTCATA ATCTGCAAGA TTTAGTGATT
TGCAATTTTA GTATCGACGC TGCCCATACC GTTCAAGGCG ATATGCAAGA TTTCTCCAGC
CTCACGGGCA AGCTACAGCG TACTTTACAT CAAATTCATA CCGAGCAAGG GCGCTCGCTG
CTGAGGATAA TTACCCTATC CCCTAACATC ACTCAGGCGG TAGATTGCAA TTACTTTGGT
GAGCGCAATG GGATCACACG CCAGCTCAAT GCCTTAGGTG TACTGCAGTT TGAGGGTAAT
TTTATTAATG ATCAACAACT TGGCCATCAA ACTTGGTATG ACCATGAAGG AAAAATCAAT
CAAGTCGAAG AACGTCAGCT CGATGGTATG TTACTCACCT ACTACCATAG TAATGGTCAG
ATAAGGGAAA CCGCGGAAAA GGATATCGAA GGCAATTATA TCAATCAGTT AAAACGCTAT
TATGAATCTG GAAATCTGTG GCTGACGCGC CCAATGGTGG CGAATCACAT CCACGGAATT
GAGTATATGT ACTATGAGGA TGGCAAGCTG CAAGCCGAAT TAACCCATGA TACGGGTAAG
CCTGTTAACG AACTTTGGTA TCATCCCAAT GGCAATCTGA AGCAAGAAGT CCACTTCAAT
CAGGTGGGCA AACGCATTGA AACTTACTAT GAAGATGGCC AACTCGCGTG GCGAGTACAA
CTCAATTCAC AAGGGGTAAA TGAAGGCCTA CGCCAAGAAT GGCACCCCAA TGGCGTGCTC
GCCAAGCAGC TCAATTTTAG TAACGGCATA GCCCATGGTA ACAGTGAACA ATGGTATCCC
AATGGGCAGT TAGAACAGTG CATTCCCTTT GAAAATGGCC ATGAGCAGGG CCTTGCCACT
TGGTACCATG AAAATGGCCA ACTCGCCCTT GAAATCTACC TTGAAAAGGG CTTAAGAGAA
GGATTATTTC GCCGTTATTA TGAAAGCGGT GTCCTATCTG CCGAAGGCCA ATATCAACAT
AATCTCTCGA TCGCGCCCTT TATTGAATAC TATGAAAACC AACAAGTTCA AATGTATTTG
CCCCACACCC AAGGCAACCG TGATGGCACT GCGCGCTGGT TTTATGAAGA CGGCACTATC
CGCACTATTA CAGAATATGT CGTTCGAGAG GGACTGGGTT ATCTCAAACA AAGCAGCACC
TACAATAAGC AAGGTATCCT CGAATCCTTT GAGAGCCATT CAAATACCCG CTGCGGCTAT
AATCTTGAAA ATAATCAAAG ACAATACTAT CAGGAGGGCA CTCCAGATAC GCGGATAGAA
TACTATCAAG ATGGAACAAT TCGTTGGTTG CTGACTCGCC TGGAAGGGGA ACGATACAGC
TCAAAATCCT TCTCTGAACA AGGCAAACTC ATCGAAACGG GTTTTATCAT CTATCTCGAT
GGTAATTACC TTGATGTCGG CCATTGGCAA CGCTTTACGC CTCAAGGCAA ACTGTATCGC
GAAGCGTGGC TCAGCGACGA TGGCAAACTC AATGAAAGCC GTCACTATTT TGATGGCGCA
GAGGATACAC AGGAACAAAC TGCGACAGTT CAAGCTGGTG CTGATGAAAC TCACTTGAAT
CTTACAGAGG TGACTTCAAC TGGAGCAAGC ACCGCAAGCG TGCAGCAAAC AGAGCAACCC
ATCCTCTCCT ATCATTTAAA ATTTGACCCA GATAGCCAAC TTTACGCCAT GAAGCGCTAT
CACCCCAACC GCCAAATCGC CGAGGAGGGC AACTTACACT TCAAAGGAGA AGATCAATTT
TGGGTAGGCA TTCATAACCA ATATGATGAG CAAGGCCGAA TCACACTATC AGAAACTTAC
ACTATGAGTG GAGAGGCGAT AGAGCACAAT ACCGAGTCGA GTGCGATTAG ATTGAATTAA
|
|---|
| Protein sequence | MSLLNVFKAK LFNAKENRGV QQDIPPQTPR PQASLAASPF KPYFSLGIQA TPAQANRVDN
QGAINRYYFD NPQTIELLGW ELKHESCIFH ETLFDSIEVN GPEQYFYLGK DKTCSLLRQH
DAAEQPRWQV ELHNLQDLVI CNFSIDAAHT VQGDMQDFSS LTGKLQRTLH QIHTEQGRSL
LRIITLSPNI TQAVDCNYFG ERNGITRQLN ALGVLQFEGN FINDQQLGHQ TWYDHEGKIN
QVEERQLDGM LLTYYHSNGQ IRETAEKDIE GNYINQLKRY YESGNLWLTR PMVANHIHGI
EYMYYEDGKL QAELTHDTGK PVNELWYHPN GNLKQEVHFN QVGKRIETYY EDGQLAWRVQ
LNSQGVNEGL RQEWHPNGVL AKQLNFSNGI AHGNSEQWYP NGQLEQCIPF ENGHEQGLAT
WYHENGQLAL EIYLEKGLRE GLFRRYYESG VLSAEGQYQH NLSIAPFIEY YENQQVQMYL
PHTQGNRDGT ARWFYEDGTI RTITEYVVRE GLGYLKQSST YNKQGILESF ESHSNTRCGY
NLENNQRQYY QEGTPDTRIE YYQDGTIRWL LTRLEGERYS SKSFSEQGKL IETGFIIYLD
GNYLDVGHWQ RFTPQGKLYR EAWLSDDGKL NESRHYFDGA EDTQEQTATV QAGADETHLN
LTEVTSTGAS TASVQQTEQP ILSYHLKFDP DSQLYAMKRY HPNRQIAEEG NLHFKGEDQF
WVGIHNQYDE QGRITLSETY TMSGEAIEHN TESSAIRLN
|
|---|
| |