Gene SO_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3787 
Symbol 
ID1171432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3938756 
End bp3939442 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content43% 
IMG OID637345558 
Producthypothetical protein 
Protein accessionNP_719324 
Protein GI24375281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA AAACTGTAGC ATCTAAGGTA TCAGAGACCC CAAAAATATC GGAGTTGGTA 
AAGCACTATG TTAATCATCT CCATTTGGGT AAGCCATTCA CTTTAGAGCA AGTTGCCTCT 
AAATATTCCC TGTCCAACGC TGATCGACAA GTCGCTAGTA AAGCCCTCCA ACGTATGGCT 
ACAGACAAGA AAGTCGCGCG TCTGGCGAAT GGCACTTATT ATCGACCAAA AGTGTCAAGG 
TTTGGGCCTC TGCCTCTGGA AACGTCCGAG ATTGTTAAGG TAGTAACCAA GACCAAAAAG 
GCGACTGTAG TTCCTGCCGG TGCTGCGGCT GTCAACCAAT TAGGCTTAGA TACCCAATTG 
CCTATGGTAT CTAGTTACTA CGTGTCTGTC AGAACTCGTG CTCAATTGAC TCAAAAATCA 
GTGAAATTTG AGTACAAAGA GACTTTGCAG CACTTTATTA ATAATTTTAC AGTGGCAGAT 
AAAGAGGTAA AACACACAGC ATTGCTGATG TGGAGTGCGC TAACGTACTT GGATAAATCA 
GCCACGTCAC TGTATGCCAA CAAATTAATC CACAAGTTCC AACAGGAATT CGATTTAGCA 
TCGCAAGCGA AATTCATTTC CGCATTACCA CCGTCTATGA ATTGGGCAAA GGAATTCTTT 
CAAACCAAAG CTATTCACAA GGACTAA
 
Protein sequence
MNIKTVASKV SETPKISELV KHYVNHLHLG KPFTLEQVAS KYSLSNADRQ VASKALQRMA 
TDKKVARLAN GTYYRPKVSR FGPLPLETSE IVKVVTKTKK ATVVPAGAAA VNQLGLDTQL 
PMVSSYYVSV RTRAQLTQKS VKFEYKETLQ HFINNFTVAD KEVKHTALLM WSALTYLDKS 
ATSLYANKLI HKFQQEFDLA SQAKFISALP PSMNWAKEFF QTKAIHKD