Gene SO_3772 details

Gene Information

• Locus tag: SO_3772
• ID: 1171420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3921478
• End bp: 3922026
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637345546
• Product: hypothetical protein
• Protein accession: NP_719309
• Protein GI: 24375266
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3103] SH3 domain protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACTCT CCCCCAACCT GCTGGCCGAA GGCCAATCCC GCTATATCTC GGATAACGTG 
TTTCTTTATC TTCTTAATGG CCCAGGTACT GATTACCGTA TTTTGGGTTC GATTGAGGCA 
GGGCAACCCA TTACGCTTCA GGGTGAAACC CAAGGCGATT ATTCAAAAAT AGTCGATCAT 
AAAGGTCGCG AAGGTTGGGT GCAGACCAAT TTAATCAGTT CAACCCCGAG TTTTCGTGAG 
CAAGTGTCAA CATTGACAAA TGAGCTAAAC GAAGCGAAAG CAAAACTGGC TGAAGTGTTA 
AATTCGACGG GTAACCAAAC CGATGAGGTT GCTGAACTTA AAGCTCAGTT AGCAGAAGCA 
CAAACCATGC TTGCTAAAGC CAATCAAGAG CGTGAAAACC TCAAAATGGC GGTTGATCAT 
AGCGCCCAAG AAACACAATT TGCCCTATGG CGTGAAGGTG GGATTATTGC CGCTGCTGGT 
TTAGTCGTCG GGGTAATCTT GGTTTATCTG CCAAGACCAC AGCGCCGCAA CAAGAAGCGT 
TGGATGTAA 

 

Protein sequence

MLLSPNLLAE GQSRYISDNV FLYLLNGPGT DYRILGSIEA GQPITLQGET QGDYSKIVDH 
KGREGWVQTN LISSTPSFRE QVSTLTNELN EAKAKLAEVL NSTGNQTDEV AELKAQLAEA 
QTMLAKANQE RENLKMAVDH SAQETQFALW REGGIIAAAG LVVGVILVYL PRPQRRNKKR 
WM